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SCNpilot_expt_500_bf_scaffold_12001_6

Organism: SCNPILOT_EXPT_1000_BF_Afipia_63_13

megabin RP 49 / 55 MC: 11 BSCG 48 / 51 MC: 11 ASCG 13 / 38 MC: 3
Location: comp(4902..5192)

Top 3 Functional Annotations

Value Algorithm Source
chemotaxis protein CheY n=1 Tax=Afipia birgiae RepID=UPI0002F2A0D3 similarity UNIREF
DB: UNIREF100
  • Identity: 90.6
  • Coverage: 96.0
  • Bit_score: 176
  • Evalue 9.60e-42
Uncharacterized protein {ECO:0000313|EMBL:EKS36102.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.6
  • Coverage: 96.0
  • Bit_score: 176
  • Evalue 1.30e-41
response regulator receiver similarity KEGG
DB: KEGG
  • Identity: 87.4
  • Coverage: 95.0
  • Bit_score: 168
  • Evalue 1.40e-39

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 291
GCGCCGATCATCATGCTGACCGGCCATTCCGAGAAGCGCCGCGTGATGGTGGCGCGGGATGCGGGCGTCACCGAATTTCTCGCCAAGCCGATTTCCGCCAAGGGGCTTTACCAGCGCATTCTCAACGTGGTCGCCAATCCCCGCCCCTTCATCAAGACCAAGAACTACTTCGGACCCGACCGCCGCCGCAACAACGGCTCGTCTTACATCGGGGTCGAGCGCCGCGTCGGCGGCAAGGCCGAAATCATGCAGCAGCCGTCGCTGCTCGAGAAAACCCGCTCGGGAAGTTAG
PROTEIN sequence
Length: 97
APIIMLTGHSEKRRVMVARDAGVTEFLAKPISAKGLYQRILNVVANPRPFIKTKNYFGPDRRRNNGSSYIGVERRVGGKAEIMQQPSLLEKTRSGS*