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SCNpilot_expt_500_bf_scaffold_3413_23

Organism: SCNPILOT_CONT_500_P_Rotifera_33_75

partial RP 42 / 55 MC: 35 BSCG 20 / 51 MC: 9 ASCG 28 / 38 MC: 22
Location: 12108..12476

Top 3 Functional Annotations

Value Algorithm Source
PREDICTED: GS homeobox 1 n=1 Tax=Saimiri boliviensis boliviensis RepID=UPI00027F724F similarity UNIREF
DB: UNIREF100
  • Identity: 46.4
  • Coverage: 112.0
  • Bit_score: 88
  • Evalue 4.40e-15
Uncharacterized protein {ECO:0000313|Ensembl:ENSCJAP00000036007}; Flags: Fragment;; TaxID=9483 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix.;" source="Callithrix jacchus (White-tufted-ear marmoset).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.8
  • Coverage: 86.0
  • Bit_score: 81
  • Evalue 9.80e-13
GS homeobox 1-like; K09310 homeobox protein GSH similarity KEGG
DB: KEGG
  • Identity: 59.3
  • Coverage: 81.0
  • Bit_score: 80
  • Evalue 4.90e-13

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Taxonomy

Callithrix jacchus → Callithrix → Primates → Mammalia → Chordata → Metazoa

Sequences

DNA sequence
Length: 369
ATGTTAGAAACAACAAAATCATTTTCAATTGAGTATTTAATTGCGAGAAAATCAACGCCACCTCCACCATCATCAACAACATCGAGATTTTTGCTTCTTCATTCGCATCTATTTCAAACATCGACAACAACACCTGTCAATGAACAGATCAAAGAGAAAAAGCCTCAAGCATTTCTACATTCCCCAACATCTCAACAATTACCGTTCGAATTAAAACGTATGCGTACAGCATTTACAAGTATTCAATTGTTAGAATTAGAACGAGAATTTTCGACAAGCATGTATCTATCGCGTTTACGTCGGATTGAAATAGCTGCTTGTCTCGGTCTTACCGAAAAACAAGTTAAAGTAATTGATTGTTTTCTTTCT
PROTEIN sequence
Length: 123
MLETTKSFSIEYLIARKSTPPPPSSTTSRFLLLHSHLFQTSTTTPVNEQIKEKKPQAFLHSPTSQQLPFELKRMRTAFTSIQLLELEREFSTSMYLSRLRRIEIAACLGLTEKQVKVIDCFLS