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SCNpilot_expt_500_bf_scaffold_6405_1

Organism: SCNpilot_P_inoc_Microbacterium_69_20

partial RP 11 / 55 BSCG 15 / 51 MC: 1 ASCG 9 / 38 MC: 1
Location: comp(3..1859)

Top 3 Functional Annotations

Value Algorithm Source
Rhamnan synthesis F; K07272 rhamnosyltransferase [EC:2.4.1.-] similarity KEGG
DB: KEGG
  • Identity: 43.0
  • Coverage: 575.0
  • Bit_score: 503
  • Evalue 1.20e-139
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5K7N9_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 62.9
  • Coverage: 601.0
  • Bit_score: 807
  • Evalue 9.20e-231
  • rbh
Rhamnan synthesis protein F {ECO:0000313|EMBL:KJL37256.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.9
  • Coverage: 612.0
  • Bit_score: 836
  • Evalue 2.60e-239

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Taxonomy

Microbacterium azadirachtae → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1857
ATGAGCGCGCAGACAGCGGCCGTTGCGTTCCCGGCAGCGGGCCGACGCGTCATCAGCTACGCCGTCTGGGACCGCCGCGGCGAGATCGAGGATTTCGTCCCGCACGCGCTCGCGGGGCTGCGGGCACACGCGGAGCGCATCATCGTGGTCGTCAACGGCGAGCTCTCCGAGGGGGGCCGGGCCACGCTTTCGCGTGTGAGCGACGAGATCATCGTGCGCGAGAACACCGGCTTCGACATCGGTGGGCACCAAGCGGTGCTTGCACACCTCGGCGACGAGCTCGATCAATACGACGAGATCGTGCTGTGCAACGACACGTGGTTCGGCCCGGTGCGCCCGTTCGCGCCGGTGTTCGAGCGCATGGATGCCCGGGAGCTCGACTTCTGGGGGATGACCGCCCACCCGCGCCTCGAGCCCAACCCGTTCACCGGATCGGGGGTGCTGCCCGAGCATCTGCAGTCGTTCTGGATCGCCGTGCGCCGCCGCATGCACCAGTCGCCGCAGTGGCGGGACTACTGGGCGCAGTTGCCGGTGTTCTCGAGCTACGAAGACGCCGTTCAACAGCACGAGGTCGTGTTCACACAGTCGTTCCGTGACGGCGGCTTCACGGCTGAGGCGGCCTTCGGGCACGCTGACTACCCGAGCGACCATGCCGCGCTGTTCAACGCGGATCTGCTGCTGCGCGACGGTTGTCCTCTACTGAAGCGCCGTCCGTTCTTCCACTTCCCGCCGTTCCTGAACCGTCACGCCGTCATCGACACGTGGACGTTGCGGGCGGTGCGCGAATACGGGTACCCGACCGAGCTCATCCTGCGAAACCTCTCCCGCACCGTGGAACCGAAGGTCGTGAACACGAACCTGGCGCTGCACGACGTGCTGCCCGAGGTCGACGTGTCGTACGACGCCGCCGCGCCGCTGCGGATCGTCGCGATCCTGCACATCTTCTACGTCGAGATGACCGACGCGATGCTCGACCTCGTCGACACGCTTCCCGGCGCCTACGATCTCGTCGTCACGACGCAGGACGAGCAGCGCGCGCAGGCCATCCGCGAGATCATCGCCGCCAGGCCTCGCGACGGTCGATCAGTCGACGTGCGGGTGCTGGCATCGAACGACGGGCGTGACCAGAGCGCCTTCCTCGTCGCCTGTCGCGACATCCTCCTGTCCGGCGACTACGACCTCGTGGTCAAACTCCACTCGAAGAAGACGCCACAGGACGGGTTCGCGATCGGTCGCCACTTCGCCGATCAGCAGTTCCGCAACCTTCTGAACAGCCCTGGCTACACGGCCAACCTGCTGGCGCTGTTCCAGCGCGAGCCGGGCCTCGGCCTCGTCTACCCCCCGATGATCCACATCGGCTACCCGACGATGGGGCGGGGCTGGTGGTCGAACAAGCCGGGGTTCGCGCAGTGGTGCGAACGCCTGGGCATCCAGGTGCCTCTCGATGAGATCTCGCCGCTGGCACCGTACGGGTCGATGTACATCGCCCGGCCCGAAGCGCTCCGCCTGCTCGTCGAACACGCGTGGCGGTACGACGACTTCGGCGGCGTCGAGGCGTACCAGGACGGTGGACTGGCGCACATCCTCGAGCGGATGCCGTCGTACGCGGCCGGCGAACTCGGCTACCACACCCGCACGGTGTCCACGGCGGAGTACATGTCCATCAGTCACACCTCGATGGAGTTCAACCTCGACCAGATGTCGGCGACGACTCCCGGCGACCTCACCGATCGCGTGCTGCTGATCAAACGCGCCGGTTACGTCGGTGAGGGCCGACTGCGCGACTTCGTCCGCATGTACTTCGGACTGCACCCGCGCGTGGGGAGGCGACTGGGCTGGCTCATCGATCCGCACAGC
PROTEIN sequence
Length: 619
MSAQTAAVAFPAAGRRVISYAVWDRRGEIEDFVPHALAGLRAHAERIIVVVNGELSEGGRATLSRVSDEIIVRENTGFDIGGHQAVLAHLGDELDQYDEIVLCNDTWFGPVRPFAPVFERMDARELDFWGMTAHPRLEPNPFTGSGVLPEHLQSFWIAVRRRMHQSPQWRDYWAQLPVFSSYEDAVQQHEVVFTQSFRDGGFTAEAAFGHADYPSDHAALFNADLLLRDGCPLLKRRPFFHFPPFLNRHAVIDTWTLRAVREYGYPTELILRNLSRTVEPKVVNTNLALHDVLPEVDVSYDAAAPLRIVAILHIFYVEMTDAMLDLVDTLPGAYDLVVTTQDEQRAQAIREIIAARPRDGRSVDVRVLASNDGRDQSAFLVACRDILLSGDYDLVVKLHSKKTPQDGFAIGRHFADQQFRNLLNSPGYTANLLALFQREPGLGLVYPPMIHIGYPTMGRGWWSNKPGFAQWCERLGIQVPLDEISPLAPYGSMYIARPEALRLLVEHAWRYDDFGGVEAYQDGGLAHILERMPSYAAGELGYHTRTVSTAEYMSISHTSMEFNLDQMSATTPGDLTDRVLLIKRAGYVGEGRLRDFVRMYFGLHPRVGRRLGWLIDPHS