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SCNpilot_expt_500_bf_scaffold_25013_2

Organism: SCNpilot_P_inoc_Microbacterium_69_20

partial RP 11 / 55 BSCG 15 / 51 MC: 1 ASCG 9 / 38 MC: 1
Location: comp(1514..2140)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family n=1 Tax=Propionibacterium acidipropionici (strain ATCC 4875 / DSM 20272 / JCM 6432 / NBRC 12425 / NCIMB 8070) RepID=K7RNG6_PROA4 similarity UNIREF
DB: UNIREF100
  • Identity: 68.4
  • Coverage: 206.0
  • Bit_score: 289
  • Evalue 3.70e-75
Transcriptional regulator, TetR family similarity KEGG
DB: KEGG
  • Identity: 68.4
  • Coverage: 206.0
  • Bit_score: 289
  • Evalue 1.20e-75
Transcriptional regulator, TetR family {ECO:0000313|EMBL:AFV89529.1}; TaxID=1171373 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium acidipropionici (strain ATCC 4875 / DSM 20272 / JCM; 6432 / NBRC 12425 / NCIMB 8070).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.4
  • Coverage: 206.0
  • Bit_score: 289
  • Evalue 5.20e-75

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Taxonomy

Propionibacterium acidipropionici → Propionibacterium → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 627
ATGACTCCGCCGTATGTGTCCCCGTTGCGTGAAGCCCAGGCTGCCGAGACGCGCAGGCGCATCCTCGAGGCCGCCGCTGAGATCTTCGGCGAGCGCGGCTATTCCGGCACCGCACTGTCGGCGATCGCGACCCAGGCAGGGGTCTCGCTCGAGACCGTCAAGCAGAACGGGCCCAAGCCGGCGCTGCTGCTCGCGTGCTTCGACAGCGCCTTCGCCGGGTCGGAGGGAGACGGCCCGCTGCACCATCGCGAGCTCGGCGCGCAGGCCGCGCCGCTGCTCGGCGACGAGATGCTCGAGTTCCACCTCGGCTGGGTCGCCGGGGCCAACGCGCGCGTCGCGCGCTTGTGGCCGCGCGTGCTCGAGGCATCCGCCGCCGACGCCGACGTCGCCGCGCGCCTTGAGCAGCTACAGGCCAATCGCCGGTACGACATTGTCAGCTCGATCACGACCTACCGCGAGAAGGGCCTGTGCCACAGTGCGAGGCCCGACGCCGAGCTCGCGTCGGAGTTCTCGTTCCTGATCTCACCCGAGGGCTACACCCAGCTCGTGATCGAGTCGGGGTGGAGCATCGACGCGTACCGCGCGTGGCTACTGCGCGCCGTGCGGAAGATGATCCTCGAGGACTGA
PROTEIN sequence
Length: 209
MTPPYVSPLREAQAAETRRRILEAAAEIFGERGYSGTALSAIATQAGVSLETVKQNGPKPALLLACFDSAFAGSEGDGPLHHRELGAQAAPLLGDEMLEFHLGWVAGANARVARLWPRVLEASAADADVAARLEQLQANRRYDIVSSITTYREKGLCHSARPDAELASEFSFLISPEGYTQLVIESGWSIDAYRAWLLRAVRKMILED*