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SCNpilot_expt_500_bf_scaffold_7129_3

Organism: SCNpilot_BF_INOC_Burkholderiales_67_9

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 3354..4412

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=1 Tax=Acidovorax sp. NO-1 RepID=H0C0X2_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 72.3
  • Coverage: 354.0
  • Bit_score: 468
  • Evalue 7.60e-129
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.3
  • Coverage: 354.0
  • Bit_score: 468
  • Evalue 1.10e-128
RpoD family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 72.7
  • Coverage: 352.0
  • Bit_score: 467
  • Evalue 5.30e-129

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Taxonomy

Acidovorax sp. NO-1 → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1059
ATGTCCAGCCGCCAGCCAACCGCCGCCAAGACCGCTGCCAGCCAACCGGCAGCAAAGAAGACCGCCAAGGTGGCCGTCAAGAAGACGACCGCCGCGCAAGTCGAGGAACTCGACAAGAAGAGCCCGAAAGCGACCGCTGCCGCCAAGAAAAGCGCAGCGGCGGCTGAAAAGCCGACCCCCGCCAAGAAGCCCGGTCGTCCGGCCAAGGGCGCGGCGGCGGCCGAAAAGTCCGCACCGGCCAAGCGCGGGCGCCCCGGCAAGGCCGCGGCCCGTGAGGTCGAGGAGGAGGATCTGTCCGACATCGAGGCCGACCTGGAGGGCGAACCCGAGGTCGACACGGCAGTCGACCAGGGCGCGGTCGAAAAGCCCAAACCGCTGCGCATGAAGATCAGCAAGGCCAAGGAACGGGCCTTGATGAAGGAATTCGGCCTGGATGAAGGCGTGCTCTCCGAGGAGGAAATGAGCACCCGCCGCGCCAACCTGAAGACGCTGCTGAAACTGGGCAAGACGCGCGGCTACCTGACACACGGCGAGATCAACGACCACCTGCCCGACAAGCTGGTCGACACCGAGACGCTGGAGGCCGTGGTCTCCATGCTGAACGACCTGGGCGTGGCCGTCTACGAGCAGACGCCCGACGCCGAGACCCTGCTGCTGACCAACACCGGCACGAGTACCGCCACCGAGGAGGAGGCCGAGGAAGAAGCCGAGGCCGCCCTGTCGACGGTTGACAGCGAGTTCGGCCGCACCACCGACCCGGTGCGCATGTACATGCGCGAGATGGGCACGGTGGAACTGCTCACGCGCGAGGGCGAGATCGAGATCGCCAAGCGCATCGAGGGCGGGTTGATGGACATGATGCAGGCCATCAGCGCCAGCCCGACCACGATCGCCGAAATCCTGTCGATGGCCGAGCAGATCCGCGAGGGCAAGGCCGTCATCAACACCATCGTCGACGGTTTTGCCGACGCCGACGAGAACGACGACTACGTGGCCGAGGAAGACTTCGACGAATACGACGAAGAGGACGACGACGACGGCAAGGGCGGCTCCAAGGCC
PROTEIN sequence
Length: 353
MSSRQPTAAKTAASQPAAKKTAKVAVKKTTAAQVEELDKKSPKATAAAKKSAAAAEKPTPAKKPGRPAKGAAAAEKSAPAKRGRPGKAAAREVEEEDLSDIEADLEGEPEVDTAVDQGAVEKPKPLRMKISKAKERALMKEFGLDEGVLSEEEMSTRRANLKTLLKLGKTRGYLTHGEINDHLPDKLVDTETLEAVVSMLNDLGVAVYEQTPDAETLLLTNTGTSTATEEEAEEEAEAALSTVDSEFGRTTDPVRMYMREMGTVELLTREGEIEIAKRIEGGLMDMMQAISASPTTIAEILSMAEQIREGKAVINTIVDGFADADENDDYVAEEDFDEYDEEDDDDGKGGSKA