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SCNpilot_expt_500_bf_scaffold_8527_1

Organism: SCNpilot_BF_INOC_Burkholderiales_67_9

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(2..1150)

Top 3 Functional Annotations

Value Algorithm Source
L-seryl-tRNA(Sec) selenium transferase {ECO:0000256|HAMAP-Rule:MF_00423, ECO:0000256|SAAS:SAAS00029253}; EC=2.9.1.1 {ECO:0000256|HAMAP-Rule:MF_00423, ECO:0000256|SAAS:SAAS00029254};; Selenocysteine synthase {ECO:0000256|HAMAP-Rule:MF_00423}; Selenocysteinyl-tRNA(Sec) synthase {ECO:0000256|HAMAP-Rule:MF_00423}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.8
  • Coverage: 383.0
  • Bit_score: 521
  • Evalue 8.80e-145
selenocysteine synthase (EC:2.9.1.1); K01042 L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] similarity KEGG
DB: KEGG
  • Identity: 61.4
  • Coverage: 373.0
  • Bit_score: 422
  • Evalue 1.60e-115
selenocysteine synthase n=1 Tax=Variovorax paradoxus RepID=UPI0003691E2E similarity UNIREF
DB: UNIREF100
  • Identity: 72.1
  • Coverage: 383.0
  • Bit_score: 522
  • Evalue 2.80e-145

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1149
ATGGCCGCGCCCAAAGAATCCGTGGTCCACGGTTCGCAGGCCTCCCAGCATCCCTCCGACACCCCCGACCCAGACCACGAGCTCGTCCAGCCCCAGCAGCTGCCGGCGCTCGACCGGCTGCTGCGCCAGCACGGCGTGGCCGCGCTGGTGCAAGAGCATGGCCACACCCTGGTCGCCGCCGAGGCGCGCGCCCTGCTCGCCGCGCTGCGCGCCCAGGCGCTGGCGCGCACGCTGGGCGCCGCGCGGATCACCGCCGGCAGCCTGGCGCAGCAGTTGGAAGATCGCCTGCGCCAGCGCCTGGCACCCGCCCTGCGCCGCGTGCTCAACCTCACCGGCACGGTGATCCACACCAACCTGGGCCGCGCCCTGCTGCCCGAAGCCGCGCTGGCCCACGTGCGGGCCATGATGGCCGGGCCCAACAACCTCGAATACGACCTCGCCAGCGGCGGCCGGGGCGACCGCGACAGCATCGTCGAAGGCCTGCTGTGCGAGCTGACCGGCGCCGAGGCCGCCACCGTGGTCAACAACAACGCCGCCGCCGTGCTGCTGGTGCTGGCGGCGCTGGCGCGCGGGCGCCAGGTGATCGTCTCGCGCGGCGAGCTGGTGGAAATCGGCGGCGCCTTTCGCATGCCCGACGTCATGGCCAGCGCCGGCGCGCGGCTGGTCGAGGTCGGCACCACCAACCGCACCCACCCGCACGACTACGAGCACGCCATCACCGGGCGCACCGCCCTGCTGATGAAGGTGCACACCAGCAACTACGCCGTGCAGGGCTTCACCCGCGCGGTCGACGAAGCCGCGCTGGCGCCGATCGCCCACGCGCATGGCCTGCCGCTGGTGACCGACCTGGGCAGCGGCGCGCTGATCGACATGACGGCCCATGGCCTGCCGGCCGAGCCGACGCCGCAGCAGATGCTGCAGGCCGGCTGCGATCTGGTCACCTTCAGCGGCGACAAGCTGCTGGGCGGCCCGCAGGCGGGGCTGATCGTCGGCCGCAAGGCGCTGGTCGACCGAGTGCGCAAGCACCCCATGAAGCGCGCCCTGCGCATGAGCAAGCTGCCGCTGGCCGCGCTGGAAGCCACGCTGCGCCTGTACCTGCGCCCCGAGCGGCTGGCGCGCGAGCTGCCCACGCTGCGCCTGCTGACGCGG
PROTEIN sequence
Length: 383
MAAPKESVVHGSQASQHPSDTPDPDHELVQPQQLPALDRLLRQHGVAALVQEHGHTLVAAEARALLAALRAQALARTLGAARITAGSLAQQLEDRLRQRLAPALRRVLNLTGTVIHTNLGRALLPEAALAHVRAMMAGPNNLEYDLASGGRGDRDSIVEGLLCELTGAEAATVVNNNAAAVLLVLAALARGRQVIVSRGELVEIGGAFRMPDVMASAGARLVEVGTTNRTHPHDYEHAITGRTALLMKVHTSNYAVQGFTRAVDEAALAPIAHAHGLPLVTDLGSGALIDMTAHGLPAEPTPQQMLQAGCDLVTFSGDKLLGGPQAGLIVGRKALVDRVRKHPMKRALRMSKLPLAALEATLRLYLRPERLARELPTLRLLTR