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SCNpilot_expt_500_bf_scaffold_14814_2

Organism: SCNpilot_BF_INOC_Burkholderiales_67_9

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(292..2376)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.1
  • Coverage: 694.0
  • Bit_score: 1255
  • Evalue 0.0
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6); K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 89.9
  • Coverage: 694.0
  • Bit_score: 1254
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=1 Tax=Acidovorax sp. NO-1 RepID=H0C457_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 90.1
  • Coverage: 694.0
  • Bit_score: 1255
  • Evalue 0.0

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Taxonomy

Acidovorax sp. NO-1 → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2085
CCCTTCCTGGAGCACGACGACGCCAACCGCGCGCTGATGGGCGCCAACATGTCGCGCCAGGCCGTGCCCGTGCTGCGCCCCGAAAAGCCGCTGGTGGGCACGGGCATCGAGCGCGTGGCGGCCATCGATTCCGGCACCGTCGTGACGGCGCGCCGTGGCGGCGTGGTGGACTACGTGGACGCCACCCGCATCGTGGTGCGCGTGCATGACGCCGAGGCCGTGGCTGGCGAGGTGGGGGTGGACATCTACAACCTCATCAAGTACCAGCGTTCCAACCAGAACACCAACATCCACCAGCGTCCGATCGTCAAGCGTGGAGACGTGCTGGCCAAGGGTGACGTGGTGGCCGACGGCGCCTCCACCGACCTGGGCGAGATCGCCATCGGCCAGAACATGCTGATTGCCTTCATGCCCTGGAACGGCTACAACTTCGAGGACTCGATCCTGATCTCCGAGAAGGTGGTGGCCGAGGAGCGCTACACCAGCATCCACATCGAGGAGCTGGTGGTGATGGCGCGCGACACCAAGCTGGGCGCCGAGGAAATCACGCGCGACATCCCCAACCTGAGCGAGCAGCAACTCAACCGCCTGGACGACTCGGGCATCATCTACGTCGGTGCCGAAGTCATGCCAGGCGACACGCTGGTCGGCAAGGTCACGCCCAAGGGCGAGACCACGCTGACGCCCGAGGAGAAGCTGCTGCGCGCGATCTTCGGCGAGAAGGCCAGCGACGTGAAGGACACCTCGCTGCGCGTCGACCAGGGCTCGCAGGGCACGGTGATCGACGTGCAGGTCTTCACCCGCGAGGGCATCCAGCGCGACAAGCGCGCGCAGCAGATCATCGACGACGAACTCAAGCGCTACCGGCTGGACCTGAACGACCAGTTGCGCATCGTCGAGGCCGACGCCTACGACCGGATCGAAAAGCTGCTGACCGGCAAGCTTGCCAACGGTGGTCCGAACAAGATCGCCAAGGGCACGAAGATCGACAAGGCCTACCTGGCCTCGGTCGACAAGTACCACTGGTTCGACATCCGTCCGGCCGACGACGACGTCGCCTCGCAGCTCGAAAGCATCAAGGCCTCCATCGAGCAGCAGCGCCACAGCTTCGACCTGGCCTTCGAGGAAAAGCGCAAGAAGCTCACGCAAGGTGACGAGCTGCCGGCTGGCGTGCTGAAGATGGTCAAGGTCTACCTGGCCGTCAAGCGCCGCCTGCAGCCGGGCGACAAGATGGCCGGCCGCCACGGCAACAAGGGCGTGGTGTCCAAGATCGTGCCGGTCGAGGACATGCCCTACATGGCCGACGGCACGCCCGCCGACATCGTGCTCAACCCGCTCGGCGTGCCTTCGCGCATGAACGTGGGTCAGGTGCTGGAAGTGCACCTGGGCTGGGCCGGCAAGGGCATCGGTCAGCGCATCAACGAGATGCTGCAGGCCGAAGGCCGTGTGGCCAAGATCCGCAAGTACCTGGGCGACCTGTACAACAGCGGCGACCGCAAGGAAGACCTGAGCCAGCTCAGCGACGAGCAGCTGCTCGAGATGGCGGGCAACCTGACCGGCGGCATGCCGTTCGCCACGCCGGTGTTCGATGGCGCCACCGAGGAGGAAATCCTCGACATGCTCAAGCTGGCGTACCCCGAGGACGTGGCCACCAGCAAGGGCCTGACGCCCACGCGTACCCAGGCCTGGCTGTTCGACGGTCGCACGGGCGAGCGCTTCGAGCGCCCGACCACCATTGGCTACATGCACTTCCTGAAGCTGCACCACCTGGTGGACGACAAGATGCACGCGCGTTCCACCGGCCCCTACTCGCTGGTCACGCAGCAACCGCTGGGCGGCAAGGCCCAGTTTGGCGGCCAGCGTTTCGGCGAGATGGAGGTGTGGGCACTGGAGGCCTACGGCGCCTCCTACACGCTGCAGGAAATGCTGACCGTCAAGTCCGACGACGTGCAGGGCCGCACCAAGGTGTACGAGTCCATCGTCAAGGGCGAGCGCTCGATCGACGCCGGCATGCCCGAGTCGTTCAACGTGCTGGTCAAGGAAATCCGCTCGCTCGGTCTCGACATCGAGCTGGAGCGCTCCTGA
PROTEIN sequence
Length: 695
PFLEHDDANRALMGANMSRQAVPVLRPEKPLVGTGIERVAAIDSGTVVTARRGGVVDYVDATRIVVRVHDAEAVAGEVGVDIYNLIKYQRSNQNTNIHQRPIVKRGDVLAKGDVVADGASTDLGEIAIGQNMLIAFMPWNGYNFEDSILISEKVVAEERYTSIHIEELVVMARDTKLGAEEITRDIPNLSEQQLNRLDDSGIIYVGAEVMPGDTLVGKVTPKGETTLTPEEKLLRAIFGEKASDVKDTSLRVDQGSQGTVIDVQVFTREGIQRDKRAQQIIDDELKRYRLDLNDQLRIVEADAYDRIEKLLTGKLANGGPNKIAKGTKIDKAYLASVDKYHWFDIRPADDDVASQLESIKASIEQQRHSFDLAFEEKRKKLTQGDELPAGVLKMVKVYLAVKRRLQPGDKMAGRHGNKGVVSKIVPVEDMPYMADGTPADIVLNPLGVPSRMNVGQVLEVHLGWAGKGIGQRINEMLQAEGRVAKIRKYLGDLYNSGDRKEDLSQLSDEQLLEMAGNLTGGMPFATPVFDGATEEEILDMLKLAYPEDVATSKGLTPTRTQAWLFDGRTGERFERPTTIGYMHFLKLHHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGASYTLQEMLTVKSDDVQGRTKVYESIVKGERSIDAGMPESFNVLVKEIRSLGLDIELERS*