ggKbase home page

SCNpilot_expt_500_bf_scaffold_2089_19

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 50 / 55 BSCG 47 / 51 ASCG 11 / 38 MC: 1
Location: comp(17139..17654)

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CDD03 similarity UNIREF
DB: UNIREF100
  • Identity: 59.5
  • Coverage: 148.0
  • Bit_score: 181
  • Evalue 9.00e-43
Transcriptional regulator {ECO:0000313|EMBL:AJP71939.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.0
  • Coverage: 148.0
  • Bit_score: 225
  • Evalue 4.50e-56
MarR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 51.1
  • Coverage: 137.0
  • Bit_score: 151
  • Evalue 1.80e-34

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 516
ATGGGTGCGCCGCACAATGCAATCGCGTTGCCGATTGAAATCTATGAGTATGCTTATTATGTGCCGCGCATGACCGAGAGTCTGGGTTTCCTTCTTAGCGATGTCTCGCGCCTGTTGCGCCGCCGTTTCGACGAGCGGGCGCGCACGAGCGGTGCGAGCGTGGCGCAGTGGCGCGTGCTCAAGATCCTCTCGCGCAGCCCCGGCCTCAACCAGGGCCAGCTCGCCGAGGCGCTCGAGGTCGAGCCGATCACCGCCTGCCGGATGATCGACCGGCTCGAGGAGGCCGGCTTTGTCGAGCGCCGCCGCGATCCCGCCGATCGCCGCGCCTGGCGTATCCACCTGACCGACAAGGCCGCGCCGGTGCTCGACGAGCTCCATGTGCTCGCGGCCGATCTGATCGAAGAGACGCTCCAGGGGTTCAGCACCCGGCAGCGCGAGGAACTGATTGCGGCGCTCGAGGGGCTCCGCGCGAACCTGACCACCGTTCAAGAGGGCAACGAGGCCGCAAATGGCTGA
PROTEIN sequence
Length: 172
MGAPHNAIALPIEIYEYAYYVPRMTESLGFLLSDVSRLLRRRFDERARTSGASVAQWRVLKILSRSPGLNQGQLAEALEVEPITACRMIDRLEEAGFVERRRDPADRRAWRIHLTDKAAPVLDELHVLAADLIEETLQGFSTRQREELIAALEGLRANLTTVQEGNEAANG*