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SCNpilot_expt_500_bf_scaffold_3307_8

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 50 / 55 BSCG 47 / 51 ASCG 11 / 38 MC: 1
Location: 5940..6785

Top 3 Functional Annotations

Value Algorithm Source
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.8
  • Coverage: 298.0
  • Bit_score: 382
  • Evalue 6.10e-103
tRNA dimethylallyltransferase; K00791 tRNA dimethylallyltransferase [EC:2.5.1.75] similarity KEGG
DB: KEGG
  • Identity: 56.5
  • Coverage: 299.0
  • Bit_score: 309
  • Evalue 1.50e-81
tRNA delta(2)-isopentenylpyrophosphate transferase n=1 Tax=Sphingomonas elodea RepID=UPI0002631D93 similarity UNIREF
DB: UNIREF100
  • Identity: 68.2
  • Coverage: 299.0
  • Bit_score: 380
  • Evalue 1.70e-102
  • rbh

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Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 846
GTGGCGCTCATCGCAGGGCCGACCGCGAGCGGCAAGTCCGCGCTCGCGCTGGCGCTGGCCGAGAAGCATCGCGGCATCGTGATCAACGCGGATTCGATGCAGGTCTATGCGGATCTGCGCGTGCTCACCGCCCGCCCCACCGCCGAGGAGGAGAAGCGCGCGCCGCACCGCCTGTTCGGCCATGTCGATGGCGCCGATGCCTATTCCGCCGCGCGCTGGGCGGCCGAGGCGCGCGGCGCGATCGCGGAGGCGCATGCGGCGGGCCGCCTCCCCATCCTGGTCGGCGGCACCGGCATGTATCTGCGCACCCTGATCGAAGGGATCGCGCCGGTGCCCGAGATCGATCCGGAAGTCCGCGCCGCGGTCCGCGCCATGGCCGNNNNNNNNNNNNNNNCCGCCCGCGTGTCGCGCGCGCTCGAAGTCGTCCGCTCCACCGGCAAGTCGCTCGGCGCATGGCAGGCGCAGCGTCACGGCGGCATCGGCGGCGAGGTGCGCATCGCCGCGCTGATCCTGCTGCCCGACAAGACCTGGCTTGCCGACCGGATCGACCGCCGCTTCCGCCACATGGTCCAGGTGGCGCAGCGAGAGGTCGAGGCGCTGCTCGCCCGCACCGACGTGCCGGACGACGCACCGGTGCTGCGCGCGATCGGGGTGCGCGAGATCGGCCTGGCGCTCCAGGGCGAGAGCAACATGGACGAGGCGCATTTCGCCGGCTCGCTCGCCACCCGCCAGTACGCCAAGCGCCAGTACACCTGGTTCCGCCGCCAGCCCCCACCCGAATGGGAACGCACGGGAGAGACACAAACGAACAGGCTCGTTGAGAAATTCGAAACAAAATTGCTATAA
PROTEIN sequence
Length: 282
VALIAGPTASGKSALALALAEKHRGIVINADSMQVYADLRVLTARPTAEEEKRAPHRLFGHVDGADAYSAARWAAEARGAIAEAHAAGRLPILVGGTGMYLRTLIEGIAPVPEIDPEVRAAVRAMAXXXXXXARVSRALEVVRSTGKSLGAWQAQRHGGIGGEVRIAALILLPDKTWLADRIDRRFRHMVQVAQREVEALLARTDVPDDAPVLRAIGVREIGLALQGESNMDEAHFAGSLATRQYAKRQYTWFRRQPPPEWERTGETQTNRLVEKFETKLL*