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SCNpilot_expt_500_bf_scaffold_5122_23

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 50 / 55 BSCG 47 / 51 ASCG 11 / 38 MC: 1
Location: 18898..19764

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator AraC family n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K3G5_AGRVS similarity UNIREF
DB: UNIREF100
  • Identity: 37.9
  • Coverage: 285.0
  • Bit_score: 193
  • Evalue 3.00e-46
Transcriptional regulator of AraC family {ECO:0000313|EMBL:GAM96961.1}; TaxID=1605283 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium U9-1i.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.4
  • Coverage: 270.0
  • Bit_score: 195
  • Evalue 1.40e-46
agpT; AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 37.9
  • Coverage: 285.0
  • Bit_score: 193
  • Evalue 9.30e-47

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Taxonomy

alpha proteobacterium U9-1i → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 867
ATGCCGCTCAAGACTGACCTCGAGTTCACGACCGCTCAAGCGACTCCATCCATCTCACGAGCGTTCGACGGCTTCGCCGTCGAGCATTTCGAATTTCAGGAGAGCGCGCCGTTCGATTACGCGCGTGAAGGCGATAGCTGGTATCTCGCGCTGCATGACATCCAGCTTGAAGCGGCCGAGGCTCGGATTAGCGACGGACAGCGAAGCGAGCGTCTCGACTTGCGCGACACGCTGACGCTGCTGCCGCCCTCGGCCAGAATCGAGGGCTGGTCAAAGCCGCTGACGGGGCGGCACTCGTTCATCGCACTCTATTTTTCACCGGAGTTGTTGGCGCCCGAACTGGGACGGCAATTCGAGACGACGCGGCTCCAACCCGTCCTTTATGGCCGGGACCGGGCAGTATCCCTGACGATGCGGAAAATGACGAAGCTGCTACGCGAGGGGCATGAGGGACGCATGCCTCTCGAACAGCTCGCAATCGTCGCGGCATGCGAGGTGCAGAGCTTCTTGCGCCCCCAGGCGGTCGCCGACCGTCCGACCCGCCTGTCCGCGGCGCAACTCAATCTCGCGACAGACTATATCGCCGCGAACATGACCGGCGACATTTCCCTGGGAGACCTGGCACATGCGGTAGGGCTGAGCAGGTTCCACTTCGCGCGCGCGTTCGCCGCTACGACAGGCACAAGTCCCTACGCATTCCTGACCGCGCAGCGCACGAAACTCGCGTCGGACCTTCTGGCGTCAACGGCGCTGCCGCTTGAAGAAGTCGCGCTCCGGTCTGGTCTTGGGACGGCAACGCGACTTCGCAGGGCAATGGCCAAATGCCATGGCGTCACGCCATTGGCATATCGCCAGCATCACAAGTAG
PROTEIN sequence
Length: 289
MPLKTDLEFTTAQATPSISRAFDGFAVEHFEFQESAPFDYAREGDSWYLALHDIQLEAAEARISDGQRSERLDLRDTLTLLPPSARIEGWSKPLTGRHSFIALYFSPELLAPELGRQFETTRLQPVLYGRDRAVSLTMRKMTKLLREGHEGRMPLEQLAIVAACEVQSFLRPQAVADRPTRLSAAQLNLATDYIAANMTGDISLGDLAHAVGLSRFHFARAFAATTGTSPYAFLTAQRTKLASDLLASTALPLEEVALRSGLGTATRLRRAMAKCHGVTPLAYRQHHK*