ggKbase home page

SCNpilot_expt_500_bf_scaffold_5395_4

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 50 / 55 BSCG 47 / 51 ASCG 11 / 38 MC: 1
Location: 1377..1700

Top 3 Functional Annotations

Value Algorithm Source
XRE family transcriptional regulator n=1 Tax=Lamprocystis purpurea RepID=UPI0003708479 similarity UNIREF
DB: UNIREF100
  • Identity: 43.4
  • Coverage: 99.0
  • Bit_score: 87
  • Evalue 8.50e-15
Uncharacterized protein {ECO:0000313|EMBL:KGC03974.1}; TaxID=292 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cepacia (Pseudomonas cepacia).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.1
  • Coverage: 102.0
  • Bit_score: 89
  • Evalue 4.10e-15
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 42.3
  • Coverage: 97.0
  • Bit_score: 86
  • Evalue 7.80e-15

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Burkholderia cepacia → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 324
ATGGCTGTCGAACATGTAACTTCCGGCGGAGGCAACGTCTTTGCCGATCTCGGCTTGGCCGATGCCGATGATCTCAAGGTCAAATCCGACCTGGCGGCACTGATGCTCCGGTCCATCCATGAGCTCAAACTGAGCCAGACTGTCGCGAGCCGAATGATCGGCATTCCGCAGCCCAAGCTGTCGAAGATCCTGAACGGCAGGTTGGACGGCATCAGCGAAGCCTATATCGCGACGGCTCTCAGGAAGCTCGGGCATGATGTCGCCTATCAGGTCAGCCCTCGGCATGAGGGCGTCGGGCAGGCTCACGTCATCGAGCTGGTCTGA
PROTEIN sequence
Length: 108
MAVEHVTSGGGNVFADLGLADADDLKVKSDLAALMLRSIHELKLSQTVASRMIGIPQPKLSKILNGRLDGISEAYIATALRKLGHDVAYQVSPRHEGVGQAHVIELV*