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SCNpilot_expt_500_bf_scaffold_6316_25

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 50 / 55 BSCG 47 / 51 ASCG 11 / 38 MC: 1
Location: comp(19776..20360)

Top 3 Functional Annotations

Value Algorithm Source
polysaccharide deacetylase n=1 Tax=Sphingomonas elodea RepID=UPI00026304D6 similarity UNIREF
DB: UNIREF100
  • Identity: 71.3
  • Coverage: 188.0
  • Bit_score: 282
  • Evalue 3.30e-73
Polysaccharide deacetylase {ECO:0000313|EMBL:AJP72379.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.1
  • Coverage: 188.0
  • Bit_score: 303
  • Evalue 1.90e-79
polysaccharide deactylase similarity KEGG
DB: KEGG
  • Identity: 66.1
  • Coverage: 189.0
  • Bit_score: 256
  • Evalue 6.00e-66

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Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 585
ATGGGCCCCGAGCAGTTCCGCGCCGACCTGGCCACCGCCAGAAGGGCGCTGGAGGATGCGAGCGGAACCCGGGTGACCGGCTATCGCGCGCCGAGCTTCTCGATCGACCGCCGTACGCCCTGGGCGCATGAAGTGCTGGCCGAGTCGGGCTATGCCTATTCCTCCAGCGTCGCGCCGGTGAAGCACGATCATTATGGCTGGCACGATGCGCCGCGTGGAGCCTTCTGGCCGGTGCCGGGTGCCGAGCTGGTCGAGATCCCGATCACGCTGGCGCGTTTCCTGGGCCGCGAAGTGACCACCGGTGGCGGCTTCTTCCGCCTGCTGCCGGGCGAAGTGACCTATCGCGCGGTGCGCGCGGCGAACGACGCGGCGCGCCCCGCCATCTTCTATTTCCATCCCTGGGAGATCGACCCGGGCCAGCCGCGGGTGCAGGATGCGCCGTTCAAGTCGAAGCTGCGCCATTATAGCCGGCTGGGCGCGATGGCGGGCAAGCTCGAGACGCTGATCGCGGGGCACGCATGGGGACGGATGGACGAGATCGCGAGCCGCGAAGCGAAGCGGCTGAAGGCGGAGCGGCGCAAGTGA
PROTEIN sequence
Length: 195
MGPEQFRADLATARRALEDASGTRVTGYRAPSFSIDRRTPWAHEVLAESGYAYSSSVAPVKHDHYGWHDAPRGAFWPVPGAELVEIPITLARFLGREVTTGGGFFRLLPGEVTYRAVRAANDAARPAIFYFHPWEIDPGQPRVQDAPFKSKLRHYSRLGAMAGKLETLIAGHAWGRMDEIASREAKRLKAERRK*