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SCNpilot_expt_500_bf_scaffold_6316_31

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 50 / 55 BSCG 47 / 51 ASCG 11 / 38 MC: 1
Location: comp(24454..25968)

Top 3 Functional Annotations

Value Algorithm Source
chain length-determining protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026CBCBA similarity UNIREF
DB: UNIREF100
  • Identity: 66.5
  • Coverage: 505.0
  • Bit_score: 652
  • Evalue 3.10e-184
  • rbh
Chain-length determining protein {ECO:0000313|EMBL:AJP72382.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.6
  • Coverage: 504.0
  • Bit_score: 757
  • Evalue 1.60e-215
lipopolysaccharide biosynthesis protein similarity KEGG
DB: KEGG
  • Identity: 47.3
  • Coverage: 512.0
  • Bit_score: 460
  • Evalue 5.40e-127

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Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1515
GTGGGGAGCCTCTACGACGAGCTGCGCGGCGCACTGCACGCGATCTGGCAGCGGCGCTGGGTGGCGCTGGCGGTGGCCTGGGGCATCTGCCTGGCCGGCTGGCTGGTGGTGTCGCAGATGCCCAACAACTATGAATCGCGCGCGCGCATCTTCGTGCAGCTGCGCCAGATCATCCCGACCGACGGGACGACGGCGCTCAACCAGCAAAAGGATCTCGACCGGGTCCGCCAGACGCTGACCGCGGCGGTGAACCTGGAGAAGGTGGTGCGCGGCACCGACCTGGCCCGCACCGTGGCGACCGACCGCGACGTGGCGGACCGGGTGGCCGGCCTCCAGAAGGCGATCAAGCTGACCGCGCAGCAGGACAATCTGTTCGAGATCAGCGTAACCGCGCCGAGCGGCAAGCTCGCCCGCCAGATCACCCAGAAGCTGATCGACATCTTCGTCGAGGCGAACCTCTCTGACAATCGCGACCAGTCGAGCCAGTCGCTCGACTTCATGGACCAGCAGCTCGACGCGCGGCAGAAGCAGCTCGCGGACGCCGAGGCGAAGAAGGCGGACTTCCAGAACCGCTATCTCGGTTCGCTGCCCGGCACCGGGTCGATCGACGATCGCGTCTCGGCGGCGCGCACCCAGCTCGCCCAGATCCAGTCCGATCTGGCGGCGGCGCAGTCGAGCCTCAACGTCGTCAACGCCCAGATGGCGAGCACCCCGGCCAATGTCGCCGGCGCCGGCGGCGGCGCGGTGACCGGCCCGGCGCGGGCGCGGCTCGCGGCGATCCAGGGCCAGCTCGCCGACGCGCGGGCCAAGGGCTATACCGACAGCCATCCCGACGTGATCGCGCTGAAGAACCAGCTCGCTGCGGCACAGAGTGCGGCGGCGCGCGAACCGGTGGTGAGCGGCGCTTCGGCCGGCGCTTCCAATCCGGTCTATATCGGCCTGCAATCGATGCGGGCCGACAAGCAGGCGACCGTCGCCGCGCTGATCCAGCGCAAGGCGCAGATCGAAGGCGACCTCAACCTGCTCCAGGCGAAGATGGCCGAAGCGCCGGGCGTGGCCGCCGAACAGGGCGAGATCGAGCGCCAATATCAGGTGCTCAAGGGCCAGTATGACACGCTGCTCGCCCAGCGCGAGCAGATGAAGATCGCGAGCCAGGCGCAGAATGTCGCCGATGCCGACAAGTTCAACGTGGTCGATCCGCCCACCCAGCCGCGCGCACCGAGCTCGCCCAACCGGCCGCTGCTGCTCACCGGCGTGCTGATCGCCGGCCTGGGCGCCGGCCTGGCCGCGGCCTTCGCGCTGGGGAAGCTGACGACGACCTTCCCGACCGCCGCCAAGCTCGAAAAAGCGAGCGGCATGCCGGTGATCGGCGCGATCGGCGAAGTGGTGACCGCGGCGCAGACCGCGATGCGCCGCAGGAAGCTGGTGCTGTTCGCCGGCGGGCTGGCCGCCTTGTGCTTCGCCTATGTCGGGCTGATCGGCGTCGAGTTCCTCCAACGCGGCATGGGAGCCTGA
PROTEIN sequence
Length: 505
VGSLYDELRGALHAIWQRRWVALAVAWGICLAGWLVVSQMPNNYESRARIFVQLRQIIPTDGTTALNQQKDLDRVRQTLTAAVNLEKVVRGTDLARTVATDRDVADRVAGLQKAIKLTAQQDNLFEISVTAPSGKLARQITQKLIDIFVEANLSDNRDQSSQSLDFMDQQLDARQKQLADAEAKKADFQNRYLGSLPGTGSIDDRVSAARTQLAQIQSDLAAAQSSLNVVNAQMASTPANVAGAGGGAVTGPARARLAAIQGQLADARAKGYTDSHPDVIALKNQLAAAQSAAAREPVVSGASAGASNPVYIGLQSMRADKQATVAALIQRKAQIEGDLNLLQAKMAEAPGVAAEQGEIERQYQVLKGQYDTLLAQREQMKIASQAQNVADADKFNVVDPPTQPRAPSSPNRPLLLTGVLIAGLGAGLAAAFALGKLTTTFPTAAKLEKASGMPVIGAIGEVVTAAQTAMRRRKLVLFAGGLAALCFAYVGLIGVEFLQRGMGA*