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SCNpilot_expt_500_bf_scaffold_8179_6

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 50 / 55 BSCG 47 / 51 ASCG 11 / 38 MC: 1
Location: comp(8905..9216)

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0003195E58 similarity UNIREF
DB: UNIREF100
  • Identity: 64.4
  • Coverage: 101.0
  • Bit_score: 145
  • Evalue 2.50e-32
Rod shape-determining protein MreD {ECO:0000313|EMBL:AJP71395.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.5
  • Coverage: 102.0
  • Bit_score: 168
  • Evalue 3.90e-39
rod shape-determining protein MreD similarity KEGG
DB: KEGG
  • Identity: 49.0
  • Coverage: 102.0
  • Bit_score: 99
  • Evalue 5.00e-19

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Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 312
CCCGTCCCGCTGGGCTTTTTCGACGACATGCTGAGCGGCCAGCCCCTGGGCAGCGCGATGCTGCTCTGGTCGGCCGCGGTGCTGATGGTGGACGTGCTCGATACGCGGCTGGTGTGGCGAGACTTCTGGCAGGACTGGCTGATCGCAAGCGGCGCGATCGCCTTCGTGCTGATCGGCGGGCGGCTGGTGGCGGCTCCCTTCACTGCCCATGTCGATACGGCGCTGCTCATCCAGATCCTCATCTCGGCGGCGCTGTTCCCCGTGGTTGCCCGCTACTGTGCGTGGCTCGAACGGGATAAGAAGCGACAATAA
PROTEIN sequence
Length: 104
PVPLGFFDDMLSGQPLGSAMLLWSAAVLMVDVLDTRLVWRDFWQDWLIASGAIAFVLIGGRLVAAPFTAHVDTALLIQILISAALFPVVARYCAWLERDKKRQ*