ggKbase home page

SCNpilot_expt_500_bf_scaffold_11164_2

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 50 / 55 BSCG 47 / 51 ASCG 11 / 38 MC: 1
Location: 1362..2732

Top 3 Functional Annotations

Value Algorithm Source
DNA repair protein RadA n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI000318719A similarity UNIREF
DB: UNIREF100
  • Identity: 85.3
  • Coverage: 456.0
  • Bit_score: 766
  • Evalue 1.70e-218
  • rbh
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.6
  • Coverage: 459.0
  • Bit_score: 786
  • Evalue 1.70e-224
DNA repair protein RadA; K04485 DNA repair protein RadA/Sms similarity KEGG
DB: KEGG
  • Identity: 79.8
  • Coverage: 456.0
  • Bit_score: 726
  • Evalue 6.30e-207
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1371
ATGGCGAAACTCAAGAAGCGTTATGTCTGCCAGGCCTGCGGCTCGGTCTCCTCGCAATGGGCCGGGCAATGCGGCGATTGCGGCGAGTGGAACCAGATGGTGGAGGATGCCGGGGCGGTGGTGACGCCGTTCCAGGCCCGCCACAACCTCCAGTCCGGCGGGCGGGCGATCCAGCTGACCGGGCTCAACACCGATATCGCGCTGCCCGAGCGCACCTCGACCGGCATCGCCGAGTTCGACCGCGCGCTGGGCGGCGGCTTCGTCGAGGGCTCCGCCACGTTGATCGGCGGCGATCCCGGCATCGGCAAGTCGACGCTGCTGCTCCAGGCGGCGGCCAAGATCGCTTCGCGGGGGCTCTCCGTCGCCTATGTCTCGGGAGAGGAAGCGGCGGACCAGGTGCGGCTGCGCGCGCGGCGGCTGGGCCTGGGCAAGGCGCCGGTGATGCTCGCCGCGGCGACTTCGGTGCGCGACATCCTGACCACGCTGGGCGAGGGCGCGCCGCCCGCGCTGCTGATCATCGATTCGATCCAGACGATGCATTCGGACCTGATCGAAGGCGCACCGGGAACGGTGAGCCAGGTGCGTGCCGCCTCGGGCGAACTGATCCGCTTCGCCAAGGAGCGCGGCACCGCGCTGGTGCTGGTCGGCCATGTCACCAAGGACGGCAGCATCGCCGGCCCGCGCGTGCTCGAGCACATGGTCGACACGGTGCTGGCGTTCGAGGGCGAGCGCAGCCACCAGTACCGCATCCTGCGCGCGGTGAAGAACCGCTTCGGCGGCACCGACGAGATCGGCGTATTCGCGATGCAGACCGAGGGGCTGGAGGAAGTCTCCAATCCCTCGTCGCTGTTCCTCACGTCGCGCGACGAGAATGTGACCGGCACGGTGGTGTTCCCCGCGCTGGAGGGAACCCGGCCGGTGCTGATCGAAGTGCAGGCGCTCACCGTGCGGCTGGCGAGCGGCGCGACGCCGCGGCGCGCGGTGGTCGGCTGGGACAGCGGGCGGCTGGCGATGATCCTCGCGGTGCTGGAGGCGCGCTGCGGACTCAGCTTCTCGACCTGCGAAGTCTATCTCAACATCGCCGGCGGCTATCGGGTGCAGGATCCGGCGGCGGATCTGGCGGTGGCGGCGGCGCTCGTCTCGGCGCTGGCCGAACGGCCGATCGCGGCGGACGCCGTGGTGTTCGGCGAGATCGCGCTGTCGGGCGAAGTGCGCCCCGTCGCACATGGCGCGCTGCGCTGCCGCGAGGCGGCGAAGCTGGGCTTCGGCCGCGCGCTCGCCCCCGCCGTGCAGGCGAAGGACAAGGGAGGGCTGCAACTGGCGGGGTTCAAGTCGCTCGGCCAGTTCGTCGATCATCTGCTGGGGCGTTAG
PROTEIN sequence
Length: 457
MAKLKKRYVCQACGSVSSQWAGQCGDCGEWNQMVEDAGAVVTPFQARHNLQSGGRAIQLTGLNTDIALPERTSTGIAEFDRALGGGFVEGSATLIGGDPGIGKSTLLLQAAAKIASRGLSVAYVSGEEAADQVRLRARRLGLGKAPVMLAAATSVRDILTTLGEGAPPALLIIDSIQTMHSDLIEGAPGTVSQVRAASGELIRFAKERGTALVLVGHVTKDGSIAGPRVLEHMVDTVLAFEGERSHQYRILRAVKNRFGGTDEIGVFAMQTEGLEEVSNPSSLFLTSRDENVTGTVVFPALEGTRPVLIEVQALTVRLASGATPRRAVVGWDSGRLAMILAVLEARCGLSFSTCEVYLNIAGGYRVQDPAADLAVAAALVSALAERPIAADAVVFGEIALSGEVRPVAHGALRCREAAKLGFGRALAPAVQAKDKGGLQLAGFKSLGQFVDHLLGR*