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SCNpilot_expt_500_bf_scaffold_11405_3

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 50 / 55 BSCG 47 / 51 ASCG 11 / 38 MC: 1
Location: comp(2084..3022)

Top 3 Functional Annotations

Value Algorithm Source
pseC; DegT/DnrJ/EryC1/StrS aminotransferase (EC:2.6.1.-) similarity KEGG
DB: KEGG
  • Identity: 58.7
  • Coverage: 312.0
  • Bit_score: 386
  • Evalue 6.20e-105
  • rbh
DegT/DnrJ/EryC1/StrS aminotransferase {ECO:0000313|EMBL:AFY21087.1}; EC=2.6.1.- {ECO:0000313|EMBL:AFY21087.1};; TaxID=1207075 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. UW4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.7
  • Coverage: 312.0
  • Bit_score: 386
  • Evalue 2.80e-104
spore coat protein n=1 Tax=Citromicrobium sp. JLT1363 RepID=UPI000225EB51 similarity UNIREF
DB: UNIREF100
  • Identity: 67.0
  • Coverage: 306.0
  • Bit_score: 427
  • Evalue 1.00e-116
  • rbh

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Taxonomy

Pseudomonas sp. UW4 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 939
CTCGTCTGGACCAGCCCGAACAGCTTCCTGGCTTCGGCCAATTGCGCGCTATATTGTGGCGCAGATGTCGATTTTGTCGACATAGACCCATTCACGCGCAACATGTCGGTGGCGGCGCTGGCGGAGAAGCTTGCGGCGGCGGACAAGTCGGGGCGCCTGCCGACGGTGGTAGTACCCGTCGATTTCGCGGGCTTTGCGGTCGATCTCAAGGAGATGCGCGAACTCGCCGACCAGTATGGCTTCAAGATCCTTGAGGATGCCAGCCATGCCACCGGCGCCTCCTATCTCGGCGAACCCATAGGGAGCGCCTGGGCCGATGCGACGGTGTTCAGCTTCCACGCGGTCAAGATCGTCACCACGGCGGAGGGTGGGCTGATTACCACCAACGACGACGTCCTCGCGCGCAAGATCCGGCTGCTGCGATCGCACGGCATGACGCGCGACACGGAGCAGATGGAAGGCGCATCTGAAGGCGACTGGTATTATGAGCAGGTTGCCCTTGGCTATAATTACCGTCTGACCGACATGCAGTCTGCACTCGGCTTGTCCCAGTTATCGCGCCTCGATGAGTGGCGCCGCCGCCGGGTTGAACTTGCCGACCGTTACGATCAGCTCTTCGCCGGTATGCCGCTGAAGCTTCCCGCGCGCGCGCAGGATAGGGAGTCCGCTTGGCACCTATATGTGATCGAGCTCTCCGATCAGGTCACGGCCACGCGCGCCGATGTTTTCTCCGGGATGCGTGCGGCGGGAATCGGCGTGAACGTTCATTATATTCCGATCCACACGCAGCCGCAGTATCGCCGATTCGGCTTCAGGCGCGGTGACTTCATCAATGCTGAGCGCTACTATGACCGGGCCATATCTATTCCGCTCTTCCCCGCAATGACCCACGAGCAGCAGCAGTTTGTCGTCGACACATTGGGCGGGTTGCTGGGATGA
PROTEIN sequence
Length: 313
LVWTSPNSFLASANCALYCGADVDFVDIDPFTRNMSVAALAEKLAAADKSGRLPTVVVPVDFAGFAVDLKEMRELADQYGFKILEDASHATGASYLGEPIGSAWADATVFSFHAVKIVTTAEGGLITTNDDVLARKIRLLRSHGMTRDTEQMEGASEGDWYYEQVALGYNYRLTDMQSALGLSQLSRLDEWRRRRVELADRYDQLFAGMPLKLPARAQDRESAWHLYVIELSDQVTATRADVFSGMRAAGIGVNVHYIPIHTQPQYRRFGFRRGDFINAERYYDRAISIPLFPAMTHEQQQFVVDTLGGLLG*