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SCNpilot_expt_500_bf_scaffold_12206_2

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 50 / 55 BSCG 47 / 51 ASCG 11 / 38 MC: 1
Location: comp(966..1517)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination/antitermination protein nusG n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FV14_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 47.6
  • Coverage: 170.0
  • Bit_score: 162
  • Evalue 3.60e-37
Transcription termination/antitermination protein nusG {ECO:0000256|RuleBase:RU000538}; TaxID=351016 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter sp. AzwK-3b.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.6
  • Coverage: 170.0
  • Bit_score: 162
  • Evalue 5.00e-37
hypothetical protein; K05785 transcriptional antiterminator RfaH similarity KEGG
DB: KEGG
  • Identity: 46.5
  • Coverage: 170.0
  • Bit_score: 160
  • Evalue 4.20e-37

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Taxonomy

Roseobacter sp. AzwK-3b → Roseobacter → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 552
ATGACCGATACCAGCGAAGCACCAAAGGACAAGTGCTGGTATCTCGCGCAGGCCAAGCCGAACGCATTGGCCATCGCCGAGTTGAATCTCCGGCGCCAGGATTTCGAGACATTTATTCCGCGGCAAGTACGTACGCGCCGCATGCGAAACGGCTTTGCCAAGGAACTGCGTCCGCTCTTCCCAGGCTATCTATTCGTGCTCGCTCATTCAACGGCCGCGGCGTGGCGAAGCATCAACGGCACGCTTGGCATTGCCCGACTCGTCCAGTTCGGCGACGCGCGCCCATCGCCGATTCCCGATGCGCTGATCACCAGCCTGAGGGAATCGTGCGACGCCGATGGCAGATTCGAGCCGGAATCGCCGCAGCCCGGCGAGAGGGTGCGACTGCTCACTGGTCCCTTTGCGGACTTCATCGGAACCGTCGAAAAGGTCGCACCGGGCCAACGCATCTGGGTATTGCTCGACCTGCTCGGGCGCGCGACCCGTATCTCCGCGCCAGTATCCAGCACTTCATCGCTCACCCCGCACGACGCGCGCGCCGCGCGAGGATAG
PROTEIN sequence
Length: 184
MTDTSEAPKDKCWYLAQAKPNALAIAELNLRRQDFETFIPRQVRTRRMRNGFAKELRPLFPGYLFVLAHSTAAAWRSINGTLGIARLVQFGDARPSPIPDALITSLRESCDADGRFEPESPQPGERVRLLTGPFADFIGTVEKVAPGQRIWVLLDLLGRATRISAPVSSTSSLTPHDARAARG*