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SCNpilot_expt_500_bf_scaffold_14431_1

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 50 / 55 BSCG 47 / 51 ASCG 11 / 38 MC: 1
Location: 3..512

Top 3 Functional Annotations

Value Algorithm Source
Cold-shock DNA-binding domain protein n=1 Tax=Sphingomonas sp. S17 RepID=F3X0P4_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 85.7
  • Coverage: 175.0
  • Bit_score: 299
  • Evalue 1.70e-78
Cold-shock protein {ECO:0000313|EMBL:AJP74190.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.5
  • Coverage: 174.0
  • Bit_score: 306
  • Evalue 2.00e-80
cspA; cold shock protein CspA; K03704 cold shock protein (beta-ribbon, CspA family) similarity KEGG
DB: KEGG
  • Identity: 87.5
  • Coverage: 168.0
  • Bit_score: 293
  • Evalue 3.90e-77

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Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 510
GGCGTCGTTAAGTTCTTCAACGGCCAGAAGGGCTTCGGCTTCATCGTCCGTGACGATGGCGGCGAAGACGTCTTCGTGCACATCTCGGCGGTCGAGCAGGCGGGCCTCACCGGCCTGGCCGAAGGCCAGCCGCTCGGCTTCACGCTCGTCGATCGCGGCGGCCGCATCTCGGCCACCGAGCTGAAGATCGATGGCGAGCCGATGCCGGTCGAAGAGCGCGCACCCCGCGAGGATCGCGGCGATCGTGGCGGCTTTGGCGGCGGCGAGCGCGGTGGCCCGCAGCGCCAGCTGACGGGCGAGAAGGCGACCGGCACGGTCAAGTTCTTCAACGCGATGAAGGGCTTCGGCTTCATCCAGCGCGATGACGGCCAGCCGGACGCGTTCGTGCACATCTCGGCCGTCGAGCGTGCGGGCATGCCGACGCTCAATGAAGGCGACCGACTCGAGTTCGAACTCGAAGTCGATCGTCGCGGCAAATATGCCGCGGTGAACCTCACGCCGTCGAGCTGA
PROTEIN sequence
Length: 170
GVVKFFNGQKGFGFIVRDDGGEDVFVHISAVEQAGLTGLAEGQPLGFTLVDRGGRISATELKIDGEPMPVEERAPREDRGDRGGFGGGERGGPQRQLTGEKATGTVKFFNAMKGFGFIQRDDGQPDAFVHISAVERAGMPTLNEGDRLEFELEVDRRGKYAAVNLTPSS*