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SCNpilot_expt_500_bf_scaffold_17650_1

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 50 / 55 BSCG 47 / 51 ASCG 11 / 38 MC: 1
Location: 2..1165

Top 3 Functional Annotations

Value Algorithm Source
DNA polymerase III subunit gamma/tau n=1 Tax=Sphingomonas elodea RepID=UPI0002631ABB similarity UNIREF
DB: UNIREF100
  • Identity: 74.6
  • Coverage: 398.0
  • Bit_score: 572
  • Evalue 2.40e-160
DNA polymerase III subunit gamma/tau {ECO:0000313|EMBL:AJP71980.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.3
  • Coverage: 387.0
  • Bit_score: 576
  • Evalue 3.00e-161
DNA polymerase III subunits gamma and tau similarity KEGG
DB: KEGG
  • Identity: 58.8
  • Coverage: 403.0
  • Bit_score: 421
  • Evalue 2.20e-115

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Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1164
TCCAAGAGCGCGTTCAACGCGCTGCTCAAGACGCTGGAGGAGCCGCCGGCGCATGTGAAGTTCCTGTTCGCCACCACCGAGGTGAACAAGGTGCCGGTGACGGTGCTCTCGCGCTGCCAGCGCTTCGACCTGCGCCGCATCCCGGCCGAGCTGCTCGCCGAGCATTTTGCCAGAGTGACCCAGGCCGAGGGCTTCGAGGCGGAGCCCGAGGCGCTGGCGCTGATCGCCCGCGCCGCCGAGGGATCGGCGCGCGACGGGCTGTCGATCCTCGACCAGGCGATCGCGCATGCGGGCCTGGAGGGCGAAGGCGTGAAGGCCGAGGCGGTGCGACAGATGCTGGGCCTGTCCGACCGTGGCGCGATTCGCACCCTGTTCGGGCTGCTGCTGGAGGGGGACGCGCCCGGCGCGCTGGCCTCGCTCCGGGGGCAGTACGACCTTGGCGTCGATCCGCAGGCGGTGCTGCGCACGCTGCTCGAGACGGTGCACGCTGTGACGCTCGCCAAGCTCGGCACCGATGCCAATTCGGGCCAGTCGGCCGAGGAGATGAAATCGCTCGAGCGCTGGGCGGCGGGGCTGAGCTTCCCGGCGCTCCACCGGCTGTGGCAGCTGGTGCTGCGCGGGCATGATGAAGTGGCGCGGGCGGTGCTGCCGATCGAAGCGGCGGAGATGGCGCTGCTGCGCGTCATCCATGCCTCGCAACTGCCCGATCCGGGTGAGCTCGCGCGCCAGATCGCCAGCGGCAGCGTCACCATCTCGGGCGGCGGCGCTCCCGCGGCGGCGGGGCCGAACGGCGCGGCGATGCCCACCAGCCTGGGCCAGCTGGCCGACTATCTCGAGGAGAAGCGCCGCTTCCAGCTCGCCACCCAGGTGCGCGACTATCTTCGCCCGGTGCGTTTCGCGGGTACCGAGGTGGAATTCGCGGCGGCGCGGCCGCTGCCGTTCGATTTCATCAAGGAACTGGGGGCGGCGCTCAAGGAGTTGACCGGCACCAACTGGAAGCTCCTGTGCGTCGATGTGCCGGCCCCGGCGATGACGCTGCGCGAGGAACAGGCGGCGAGCGAGCAGGCCGAGCGCGATGCAGTGCTTGCCTCGCCGATGGTCGCCGCCGCGATGGAAGCCTTTCCCGATGCCGAGCTGATCGGCTGGAGCAAGACCGGAAGTTAG
PROTEIN sequence
Length: 388
SKSAFNALLKTLEEPPAHVKFLFATTEVNKVPVTVLSRCQRFDLRRIPAELLAEHFARVTQAEGFEAEPEALALIARAAEGSARDGLSILDQAIAHAGLEGEGVKAEAVRQMLGLSDRGAIRTLFGLLLEGDAPGALASLRGQYDLGVDPQAVLRTLLETVHAVTLAKLGTDANSGQSAEEMKSLERWAAGLSFPALHRLWQLVLRGHDEVARAVLPIEAAEMALLRVIHASQLPDPGELARQIASGSVTISGGGAPAAAGPNGAAMPTSLGQLADYLEEKRRFQLATQVRDYLRPVRFAGTEVEFAAARPLPFDFIKELGAALKELTGTNWKLLCVDVPAPAMTLREEQAASEQAERDAVLASPMVAAAMEAFPDAELIGWSKTGS*