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SCNpilot_expt_500_bf_scaffold_21337_1

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 50 / 55 BSCG 47 / 51 ASCG 11 / 38 MC: 1
Location: 3..1151

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00036D468B similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 382.0
  • Bit_score: 732
  • Evalue 2.30e-208
  • rbh
Putative outer membrane protein oprJ {ECO:0000313|EMBL:KEZ16641.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 382.0
  • Bit_score: 732
  • Evalue 3.30e-208
RND efflux system outer membrane lipoprotein similarity KEGG
DB: KEGG
  • Identity: 49.7
  • Coverage: 368.0
  • Bit_score: 320
  • Evalue 6.70e-85
  • rbh

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Taxonomy

Sphingobium yanoikuyae → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1149
AGCCGAAAGGTCGAATGGCCGCGCGGCATCGGCTTCACCGACACTCAATCTGTCCAACTTGAGGCCAGCTGGGAGATCGACCTGTTCGGCAGACTTCGGCAAAGCGTCGAGGCCGCCGATGCCGAGCTTGGTGTAGCCGAGGAAGACAGAAGGTCGGTCCTGCTCAGCATGCTTGCGGAAATCGCGACAAACTATGTGGAACTTCGCTCTGCGCAGGAGCGCCTTGGGATCGCAGGGCGCAATGTCGACCGTCTCAAGGCTACATTCGATACCCTGACACGCCTCCAGAAGGCCGGGCTCGCGAGCGGTTCGAGCGTTGCTCAGGCGAGGGCGGAATGGCAGTCGGCTCTCGCTCAGCTTCCCTTGTGGCGTGGCCGCATCGCCCGGCATTCGCACGCCATTGGCGTTCTGACAGGAGGATTTCCTGGCGATCTCGGCCTGGAATTTGAACGCACGCCGCATGTTCTACCGTCTGCGCCAGCGCTTCCCGTGTCCGTGCCCTCTCAGGTGTTGCGAGACCGGCCCGATGTGCGTGCGGCCGAGCGACGAATAGCTGTGGCTACCGCGCGGCAGAATGTCGCTGTGGCCGACCTCTTCCCGCGCTTTCGCATCCCGCTCACCTTAGGCACCGCGGCAAGCGGTTTCAGCTCGCTCTTCTCCGCAGCCAGCACCATCTGGAGTGTCGCGGCCAACGGTAGCCAGACCTTGTTCGACGACGGTCAGCGCAAGGCTCGCATCCGCGCCGCGGAGGCGATCACGGCGACGCAGCGGCTTCAGTATGAACAGACTGTCCGCGTCGCCTTCAGGGATGTCGAGGATGCGCTGACCGGGATTGAGACAGAGGCGACGCGACGCGATGCACTCGGCGCCGCAACTGTCGACAGCCAGACAGCCCTCGATCGGGCACTGCGCGAGCGTCGCGCCGGCACCCTGGATTATCTCGACCTGCTGATAGCCCAGCGCTCCCTGTTCGCCGCACAGGATTCCTTCGCGCAAAGCAATGCGGCTCAAGCCGTCAACCTTATCGCTCTTGCAAAGGCGCTCGGCGGTGGGTGGCAGACCGTCTTCGAACAAGGACAATCAGATGCGACGCCCGAAGCGCAGCCTTCTACAGCTTCGCCTTCGCAAAAATCTCCACCAGTTCGTTGA
PROTEIN sequence
Length: 383
SRKVEWPRGIGFTDTQSVQLEASWEIDLFGRLRQSVEAADAELGVAEEDRRSVLLSMLAEIATNYVELRSAQERLGIAGRNVDRLKATFDTLTRLQKAGLASGSSVAQARAEWQSALAQLPLWRGRIARHSHAIGVLTGGFPGDLGLEFERTPHVLPSAPALPVSVPSQVLRDRPDVRAAERRIAVATARQNVAVADLFPRFRIPLTLGTAASGFSSLFSAASTIWSVAANGSQTLFDDGQRKARIRAAEAITATQRLQYEQTVRVAFRDVEDALTGIETEATRRDALGAATVDSQTALDRALRERRAGTLDYLDLLIAQRSLFAAQDSFAQSNAAQAVNLIALAKALGGGWQTVFEQGQSDATPEAQPSTASPSQKSPPVR*