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SCNpilot_expt_500_bf_scaffold_20860_1

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 50 / 55 BSCG 47 / 51 ASCG 11 / 38 MC: 1
Location: 123..863

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI0003804AA0 similarity UNIREF
DB: UNIREF100
  • Identity: 99.6
  • Coverage: 246.0
  • Bit_score: 473
  • Evalue 1.60e-130
  • rbh
Type-F conjugative transfer system pilin assembly protein TrbC {ECO:0000313|EMBL:KEZ13749.1}; Flags: Precursor;; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 246.0
  • Bit_score: 473
  • Evalue 2.30e-130
type-F conjugative transfer system pilin assembly protein TrbC; K12059 conjugal transfer pilus assembly protein TrbC similarity KEGG
DB: KEGG
  • Identity: 68.9
  • Coverage: 244.0
  • Bit_score: 332
  • Evalue 1.40e-88
  • rbh

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Taxonomy

Sphingobium yanoikuyae → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 741
ATGCGCCTCGTCAGGATCGGGCTTTTCGCCCTTGTCGGCACCGTCGCCCTCTCGGCACTTGCCCAGACGATCGAAGGTCAGGATGTCGACGCGATCAGGAAGCGCTCGGCCGAGATGAAGGCGGATGCTGAAGCGCTGGTGGACCATGTGAAGGACAGGGGTGTGCGCTTCCGGGAAGAGGCTGGCGCGGTCCAGGAAGGCGGTGTGGCGAACATGCGACGCGTCGCCGCGAGCGAGCTCCCCGTCGGACCGCCTGGCGCGGTCGATTTCGACGAGATCGTCAAAGGGGCTGCGGCCAATGCGTCCTTGCCTAGCGGCGATGCACCAAAGCTGATCGTGTTTGCCAGCCTGTCCATGCCGCAAGCGTCGCTGAAGCGTCTGATCGCCGACACGGCCCAGGCCGGCGGCGTGGTGGTGTTTCGCGGCTTCCCGGACAATTCGGCCAAAGCCTTTGTGAAACAGCTTGGCGCAGTGGTCTCGCGTGACGACATGACCAGCATCGGCATCGATCCGCGGCTGTTTCGCGCGTTCAGCGTCCAGGCGGTGCCGACCTACGTCTCGGTTTCGTCCGACTTCGACCTGTGCGCCGGTTTCAACTGCCAGACGAAACTACCGCCTTTCGACCGTATCGTTGGCAACGTCAGCCTGGAATATGCCCTCGAGCAGTTCGCGCAGGGCAGGGGGCCCGGCGCGCGGGTAGCCGCGGTCGGGCTGTCGAACCTGCGCAAGGCAAATCCATGA
PROTEIN sequence
Length: 247
MRLVRIGLFALVGTVALSALAQTIEGQDVDAIRKRSAEMKADAEALVDHVKDRGVRFREEAGAVQEGGVANMRRVAASELPVGPPGAVDFDEIVKGAAANASLPSGDAPKLIVFASLSMPQASLKRLIADTAQAGGVVVFRGFPDNSAKAFVKQLGAVVSRDDMTSIGIDPRLFRAFSVQAVPTYVSVSSDFDLCAGFNCQTKLPPFDRIVGNVSLEYALEQFAQGRGPGARVAAVGLSNLRKANP*