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SCNpilot_expt_500_bf_scaffold_28808_1

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 50 / 55 BSCG 47 / 51 ASCG 11 / 38 MC: 1
Location: comp(19..1248)

Top 3 Functional Annotations

Value Algorithm Source
conjugal transfer protein TraH n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00036EFA2C similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 409.0
  • Bit_score: 794
  • Evalue 7.00e-227
  • rbh
Conjugative relaxosome accessory transposon family protein {ECO:0000313|EMBL:KEZ16672.1}; Flags: Precursor;; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 409.0
  • Bit_score: 794
  • Evalue 9.80e-227
TraH family protein; K12072 conjugative transfer pilus assembly protein TraH similarity KEGG
DB: KEGG
  • Identity: 76.0
  • Coverage: 408.0
  • Bit_score: 633
  • Evalue 5.00e-179
  • rbh

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Taxonomy

Sphingobium yanoikuyae → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1230
CCCCAGAAGAGCGTGTCTCCCTTCAATCTGCAATTACCGAGCGCCAGAGCGGGCTGCGGCGGCATAGATCTGTTCGCAGGCTCCTTCTCCTTCATCAACGCGAGTGAGATCGTTGCGATGCTGAAGGCGACGGCGAACAACGCGCTTGGTTTCGCCTTCAAGCTCGCCATCGACAGTGTGTCGCCGGAGATCGGCAAGGTAATGGATGAGTTCTCCCAGAAGGCGCAGCTCCTCAACCAGATGAACATCTCCTCGTGTGAGACCGCCCAGGCTCTGGTTGGCGGGATCTGGCCCCAGATGGAGACGACACGATCCACGATCTGCGAGGCGGTAGGGAACAGCCAGGGCATCTTTTCCGACTGGGCGGCGGCACGGCAGGGCTGCAATAATGGTGGCCAGCGCGACAGCACGATTGCCCGAAACAATGATCCGCGAATGCGCGAGCAGCTCATCGGCGAACCGCACAACTACACCTGGGAGGCGCTGCGCAAATCGCAGAAGTTCGGGGCCTTCGACCAGGAATTCTCGGAATACATCATGACGATCGTGGGCACGGTCGTGACCCGGCCGCCAACTGGCAGCGATCAGGGGCCGCAGGTGGATATCGTGGGCCCGGCCGAGGAAGCGGTGGTCACCGCGCTCCTGGATGGCACTGCCAACGCGCCGGCGGTGAAGATCCTCAAATGTACGAACTCGGACTGCACGACGATTGGCGAGCAAGCCCTCACGGTTCCCGCGAGTGCTGCATTGCGGCCGCGGATCTCAGCGATGATCACCTCGATCAGCAGCAAGATCCGCAGTGACACCGCGCTAGATGCCGGGGAGCGGCAGCTTCTGAACATCGCTACGATCCCGCTGTACAAAATCCTCGCGGTTCAGGCGATGGCCCATCAGGTGCTGGCCGACGGGGAGATCCAGACGCTCTCCGAGATCGTCGCAATCGACATGCTCAACGCGATGGTCGACAACATACTCGACCGGGTTGAGCAGGCGAAGGTCTTCTATCAGACGGCCGACCAGGAAACCGCTTCGCAGTGGCGCCAGCAAATCGCAGCGACGCGCGCGAAATTCGCGCAGCGCGACATCAAGCTGAGCAATAAGCTCAATGAGACGCTGATGATCATCAACCGCAGCGTTATGCTCGAATCCACGCTGCAGAACGCGATGTCACCGGGCATGCAGGCAGCACTCAGCTTTTCGCGGAGCCTCAATGTCCAGGGCCTGATGTAA
PROTEIN sequence
Length: 410
PQKSVSPFNLQLPSARAGCGGIDLFAGSFSFINASEIVAMLKATANNALGFAFKLAIDSVSPEIGKVMDEFSQKAQLLNQMNISSCETAQALVGGIWPQMETTRSTICEAVGNSQGIFSDWAAARQGCNNGGQRDSTIARNNDPRMREQLIGEPHNYTWEALRKSQKFGAFDQEFSEYIMTIVGTVVTRPPTGSDQGPQVDIVGPAEEAVVTALLDGTANAPAVKILKCTNSDCTTIGEQALTVPASAALRPRISAMITSISSKIRSDTALDAGERQLLNIATIPLYKILAVQAMAHQVLADGEIQTLSEIVAIDMLNAMVDNILDRVEQAKVFYQTADQETASQWRQQIAATRAKFAQRDIKLSNKLNETLMIINRSVMLESTLQNAMSPGMQAALSFSRSLNVQGLM*