ggKbase home page

SCNpilot_expt_500_bf_scaffold_2320_4

Organism: SCNPILOT_EXPT_750_P_Alphaproteobacteria_novel_39_47

near complete RP 46 / 55 MC: 1 BSCG 47 / 51 MC: 4 ASCG 10 / 38 MC: 2
Location: comp(3354..3506)

Top 3 Functional Annotations

Value Algorithm Source
Integrase catalytic subunit (Fragment) n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9WDB5_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 58.3
  • Coverage: 48.0
  • Bit_score: 64
  • Evalue 4.80e-08
Transposase {ECO:0000313|EMBL:AIL13783.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.2
  • Coverage: 48.0
  • Bit_score: 83
  • Evalue 8.20e-14
integrase catalytic subunit similarity KEGG
DB: KEGG
  • Identity: 52.1
  • Coverage: 48.0
  • Bit_score: 61
  • Evalue 7.40e-08

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 153
ATGCTATCGCTAAGAACAGCTTATGCAACGATTAAAGGATTTGAAGTTATGCCTATGTTTAAAAAAGGGAAGATGGATCTTTGGAAGTATGATCAAGGACTCAAGGGAGAAATCCGTCTAGTTAAACAACACTTCAACGTCTATACTGCTTAA
PROTEIN sequence
Length: 51
MLSLRTAYATIKGFEVMPMFKKGKMDLWKYDQGLKGEIRLVKQHFNVYTA*