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SCNpilot_expt_500_bf_scaffold_3185_1

Organism: SCNPILOT_EXPT_750_P_Alphaproteobacteria_novel_39_47

near complete RP 46 / 55 MC: 1 BSCG 47 / 51 MC: 4 ASCG 10 / 38 MC: 2
Location: comp(81..1259)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein ImpC n=1 Tax=Salmonella bongori N268-08 RepID=S5MPH8_SALBN similarity UNIREF
DB: UNIREF100
  • Identity: 69.6
  • Coverage: 392.0
  • Bit_score: 550
  • Evalue 1.30e-153
Uncharacterized protein {ECO:0000313|EMBL:AIL13276.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.0
  • Coverage: 392.0
  • Bit_score: 782
  • Evalue 3.70e-223
type VI secretion protein VipB; K11900 type VI secretion system protein ImpC similarity KEGG
DB: KEGG
  • Identity: 69.6
  • Coverage: 392.0
  • Bit_score: 550
  • Evalue 4.10e-154

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Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1179
ATGACAACCACAACGCAAAACGCTCCCATTAAGATTCGTCTTCTTAATGTCACGAAGACAGAACTTATTCTCGACTTAGAAAAAGCTTGTGAATTTGACCAAAGCCAGTTGTTTAAGAAGGTTTACGAAGAAGAATATGGCACTTTTGGCGGTTCACCATACTCTTTCTTAATGGGTGATTTTGAGTTTGGCCGCAATCCACAAGAGACTGAATTATTAACAAAAATTTCTCAAGTTGCTGCTGCTGCTCACGCTCCATTCATTGCAGCCGCAAACCCTAACTTATTTGACCTTATTAGTTTTTCCGAATTAGGTCACCCAAGAGATTTATCTCGCATTTTTGACTCAACAGAGCTTGGAAAGTGGGCATCATTCCGCGAAACTGAAGATTCACGTTATGTAGCTCTCACCCTCCCCCATATCTTAATGCGCCTTCCTTATGGAGGTGAGAACGGTCAAATGGTAATGGGGCTGAACTTTATTGAAGATGTTGATGGAACTGACAACTCTAAATTCTGCTGGGGAAGCTCAGCTTGGGGACTCGCTCAAAGAATTCTTCATGCCGCAACAGAGTATGGCTGGCCAGCTGCGATCCGTGGCGTTGAAGGCGGCGGTATGGTTGAGGATCTTCCTTACTATACTTTCAAGACAACCGATGGCGATGTCGCACTTAAATGCCCCACAGAGATCTCTATTACAGATCGTCGCGAGAAAGAGTTGAGTGACCTTGGATTTATTGGTCTGGTTCATTGTAAAAACCGAGATTATGCAGCCTTCTTTGGCTCACAAACTTGCCAGAAACCGAAGCTTTACAACTTAGATGAAGCAAACTCAAATGCGCGACTCTCTGCAAGATTGTCTTATATTTTGGCGGCCTCACGCTTTGCGCACTACATTAAGGTCATTATGCGCGATAAGGTTGGTAGCTTTATGTCTCGAGCAGATGTAGAGACCTATCTCAATAACTGGATTGCCTCATATGTGCTCCTCACTGATGAAGCAAGTCAACCCGTAAAAGCACGTTACCCGCTTCGTGAAGCTCGAGTCGATGTCTATGACGTTCCTGGACAACCTGGAAGCTATAGAGCTGTCGTCTTCTTAAGGCCTCACTTTCAAATGGAAGACTTAACGGCATCCATTCGTCTTGTGGCTGCCTTACCAAAACGGGCTGCGGGCTGA
PROTEIN sequence
Length: 393
MTTTTQNAPIKIRLLNVTKTELILDLEKACEFDQSQLFKKVYEEEYGTFGGSPYSFLMGDFEFGRNPQETELLTKISQVAAAAHAPFIAAANPNLFDLISFSELGHPRDLSRIFDSTELGKWASFRETEDSRYVALTLPHILMRLPYGGENGQMVMGLNFIEDVDGTDNSKFCWGSSAWGLAQRILHAATEYGWPAAIRGVEGGGMVEDLPYYTFKTTDGDVALKCPTEISITDRREKELSDLGFIGLVHCKNRDYAAFFGSQTCQKPKLYNLDEANSNARLSARLSYILAASRFAHYIKVIMRDKVGSFMSRADVETYLNNWIASYVLLTDEASQPVKARYPLREARVDVYDVPGQPGSYRAVVFLRPHFQMEDLTASIRLVAALPKRAAG*