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SCNpilot_expt_500_bf_scaffold_3837_1

Organism: SCNPILOT_EXPT_750_P_Alphaproteobacteria_novel_39_47

near complete RP 46 / 55 MC: 1 BSCG 47 / 51 MC: 4 ASCG 10 / 38 MC: 2
Location: comp(113..502)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S11 n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=RS11_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 83.7
  • Coverage: 129.0
  • Bit_score: 229
  • Evalue 2.20e-57
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.4
  • Coverage: 129.0
  • Bit_score: 255
  • Evalue 4.00e-65
30S ribosomal protein S11; K02948 small subunit ribosomal protein S11 similarity KEGG
DB: KEGG
  • Identity: 83.7
  • Coverage: 129.0
  • Bit_score: 229
  • Evalue 6.90e-58

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Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 390
ATGGCCAAGCCAGCACAAAGAATTCGACGTCGTGAGCGTAAAAACATTACCTCCGGTGTGGCACATATTAATGCTACTTTTAATAATACCATGATTACAATTACAGATCCTCAAGGAAATGCCGTTTCATGGTCATCAGCAGGTATGATGGGCTTTAAGGGCTCACGTAAATCCACACCATATGCCGCTCAAATGGCAGCTGAAGATGCTGGAAAAAAAGCCTCAGAGCACGGGATGCGTGTGTTAGAAGTAGAAGTTAATGGGCCAGGTTCTGGACGCGAGTCAGCACTACGTGCCTTACAATCTATTGGTTTTACAGTGACTTCTATTCGTGATATGACGCCGGTACCCCATAACGGATGCCGTCCTCCAAAGCGTCGTCGCGTTTAA
PROTEIN sequence
Length: 130
MAKPAQRIRRRERKNITSGVAHINATFNNTMITITDPQGNAVSWSSAGMMGFKGSRKSTPYAAQMAAEDAGKKASEHGMRVLEVEVNGPGSGRESALRALQSIGFTVTSIRDMTPVPHNGCRPPKRRRV*