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SCNpilot_expt_500_bf_scaffold_3837_6

Organism: SCNPILOT_EXPT_750_P_Alphaproteobacteria_novel_39_47

near complete RP 46 / 55 MC: 1 BSCG 47 / 51 MC: 4 ASCG 10 / 38 MC: 2
Location: comp(3471..3665)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L30 n=1 Tax=Magnetospirillum sp. SO-1 RepID=M3AEG3_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 65.6
  • Coverage: 61.0
  • Bit_score: 83
  • Evalue 7.40e-14
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.4
  • Coverage: 64.0
  • Bit_score: 126
  • Evalue 1.80e-26
rpmD; Ribosomal protein L30; K02907 large subunit ribosomal protein L30 similarity KEGG
DB: KEGG
  • Identity: 62.9
  • Coverage: 62.0
  • Bit_score: 82
  • Evalue 6.80e-14

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Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 195
ATGACTAAGGTACAGAAGAAAGTTCGCATTACGCAAATCGCAAGTGCAAATCGTCGCCCTGCTAGCCAAACGGCTGTTTTAATCGGGTTAGGACTAAACAAGTTGCATCGTACACGAGAGTTAGAGGATACCCCCTCTATTCGTGGAATGATTAATAAAGTAAAACACCTCTTGCGTGTTGAAGAGAATTTTTAG
PROTEIN sequence
Length: 65
MTKVQKKVRITQIASANRRPASQTAVLIGLGLNKLHRTRELEDTPSIRGMINKVKHLLRVEENF*