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SCNpilot_expt_500_bf_scaffold_3837_8

Organism: SCNPILOT_EXPT_750_P_Alphaproteobacteria_novel_39_47

near complete RP 46 / 55 MC: 1 BSCG 47 / 51 MC: 4 ASCG 10 / 38 MC: 2
Location: comp(4217..4570)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L18 n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B54115 similarity UNIREF
DB: UNIREF100
  • Identity: 62.5
  • Coverage: 120.0
  • Bit_score: 146
  • Evalue 1.70e-32
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.7
  • Coverage: 117.0
  • Bit_score: 220
  • Evalue 1.70e-54
ribosomal protein L18, bacterial type similarity KEGG
DB: KEGG
  • Identity: 61.3
  • Coverage: 119.0
  • Bit_score: 143
  • Evalue 3.40e-32

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Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 354
ATGTTAACTGTGCAAGATAAATTCAATCGTCGTAAACAAAGAGTTAGAACACATATTGCGCGTGTTGCTGCTGAACGCCCCAGGCTCACAGTCTATCGCTCTAATAAACACATCTATGCTCAAGTTATTGACGATCAAAATCGCCGAACTTTGACGGCTGCTTCAACTCTTGATAAGGACGTAAAGGGAAGCGGTGGCAATAAGGCAGCAGCTGAATTAGTTGGTAAGTTGGTTGCTGAAAAAGCCAAAAAATTAGGTGTTACAAATGTTGTTTTTGATCGAGGAGCATACCTTTATCATGGCCGTGTGAAGGCATTGGCTGAAGCTGCTCGTGCTCATGGCTTATCATTCTAA
PROTEIN sequence
Length: 118
MLTVQDKFNRRKQRVRTHIARVAAERPRLTVYRSNKHIYAQVIDDQNRRTLTAASTLDKDVKGSGGNKAAAELVGKLVAEKAKKLGVTNVVFDRGAYLYHGRVKALAEAARAHGLSF*