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SCNpilot_expt_500_bf_scaffold_3837_12

Organism: SCNPILOT_EXPT_750_P_Alphaproteobacteria_novel_39_47

near complete RP 46 / 55 MC: 1 BSCG 47 / 51 MC: 4 ASCG 10 / 38 MC: 2
Location: comp(5855..6394)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L5 n=1 Tax=Elioraea tepidiphila RepID=UPI000374E757 similarity UNIREF
DB: UNIREF100
  • Identity: 73.0
  • Coverage: 178.0
  • Bit_score: 269
  • Evalue 2.00e-69
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.4
  • Coverage: 179.0
  • Bit_score: 350
  • Evalue 1.30e-93
rplE; 50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 similarity KEGG
DB: KEGG
  • Identity: 72.5
  • Coverage: 178.0
  • Bit_score: 269
  • Evalue 1.10e-69

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Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 540
ATGGTCCGGTTACGCGAACATTATGAAAAAGTTGTTAGAGCTGAGCTTGTAAAGCAGTTCAATTATACAAATCCGATGGAAGTTCCTAAGATTGAAAAAATTGTTCTGAATATGGGGGTAGGTGAAGCAGCACAAGATAAAAAGAAAATTGAAATTGCTGTGAGTGAGCTTACAGCGATTGCTGGTCAAAAGCCAGTAACAACAAAGGCAAAGAAGTCAATTGCTGGCTTTAAGGTGCGTGAAGGTGTTCCGTTAGGTGCAAAAGTTACGCTTCGGCAAGCTCGTATGTATGAATTTTTAGATCGTCTTGTGAATATTGCGATGCCTCGTATTCGTGATTTTAGAGGAATTTCTAAAAAATGCTTTGATGGGCGTGGAAATTTTGCTATGGGCATAAAAGAGCATATCGTTTTCCCCGAGATTGACTATGACAAGGTTGAGAAGGTTCGTGGTCTAGATATTATTATCGTGACGACTGCTCGAACAGATTCAGAAGCTTTGGCTTTGTTGAGTGGGTTTAATTTCCCCTTTATGAATTAA
PROTEIN sequence
Length: 180
MVRLREHYEKVVRAELVKQFNYTNPMEVPKIEKIVLNMGVGEAAQDKKKIEIAVSELTAIAGQKPVTTKAKKSIAGFKVREGVPLGAKVTLRQARMYEFLDRLVNIAMPRIRDFRGISKKCFDGRGNFAMGIKEHIVFPEIDYDKVEKVRGLDIIIVTTARTDSEALALLSGFNFPFMN*