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SCNpilot_expt_500_bf_scaffold_3918_6

Organism: SCNPILOT_EXPT_750_P_Alphaproteobacteria_novel_39_47

near complete RP 46 / 55 MC: 1 BSCG 47 / 51 MC: 4 ASCG 10 / 38 MC: 2
Location: comp(3885..4808)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein {ECO:0000313|EMBL:AIL12601.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.4
  • Coverage: 307.0
  • Bit_score: 606
  • Evalue 1.70e-170
Redox-sensitive transcriptional activator id=3924194 bin=GWC2_Alphaproteobacteria_42_16 species=Caenispirillum salinarum genus=Caenispirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + similarity UNIREF
DB: UNIREF100
  • Identity: 39.6
  • Coverage: 316.0
  • Bit_score: 240
  • Evalue 2.90e-60
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 35.5
  • Coverage: 296.0
  • Bit_score: 212
  • Evalue 1.60e-52

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Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 924
TTGTTAGACCTTAAACAATTATCTGCATTTTATTATGTTGCAAAAACAAGAAGCTTCACTTTGGCTGAGACAATAGTCGGCGTCAAACAATCATGGTTGAGTCGTCAAATTTCTGAGTTAGAAGACCAATTTGGGAGTCTGTTATTGGAAAGAGGCCATGGCACTGTTTCTTTAACACCCGAAGGACAACTAGTCTATGAAGTAGTTGGAAAGCTCTTATTTGAGGCTAAAATAATTGAAAGCCTCATGTCTGAAAAGCATAATGAACCGAAAGGTAAGCTTAATATAGCAACGACAGTGGGTCATGCAGCATGGCTAATTCATTATGTACCCGGCTTTTTGAAAAAATACCCAGAGATGCGAATAAGCATTAGCGGAAACGATGAAAATTTGGATATGCGATCTCAAAATGCTGATGTTGCCATTAGACCTTTTGTTCCTAAGAGCCCTGAACTTGTCCATATATACCTGCTGTCTTATCCCTTAGGCTTATTTGCAAGCCCTTTATACCTGAAAGAGTTTGGTGTTCCCAAAAAGCCAGAAGATTTAGATAACCATCGGTTAATTGCATTTGCTAAAGATAAGAGAATTCCATTTGGAAATGTAGATTGGCATTTAAAGCTTGGGACAAAAAATGACGAAACGAGAGAGCCTTATTTGCAAGTTAACTCTGCATTAGGACTCGCGAGAGCAGCTGAACTTGGTTTAGGAATCGTATCAATTTCAAAATTTCAAGAAGTATCTAAAGGCGTAAAGCTCATAGAAGTTCTTTCAGACATAGAGGGACCTATGGTTGATGTACACTATGTATATCCCAAGAGGCTTGAGCATGTTAAACGCCTTACAGTCTTTGGGGACTATATGGTTGAGATTTTAGAAAAAGAGAGTAAAAAGCCAGATTCTCATATTTTTAGAAAAAACTAG
PROTEIN sequence
Length: 308
LLDLKQLSAFYYVAKTRSFTLAETIVGVKQSWLSRQISELEDQFGSLLLERGHGTVSLTPEGQLVYEVVGKLLFEAKIIESLMSEKHNEPKGKLNIATTVGHAAWLIHYVPGFLKKYPEMRISISGNDENLDMRSQNADVAIRPFVPKSPELVHIYLLSYPLGLFASPLYLKEFGVPKKPEDLDNHRLIAFAKDKRIPFGNVDWHLKLGTKNDETREPYLQVNSALGLARAAELGLGIVSISKFQEVSKGVKLIEVLSDIEGPMVDVHYVYPKRLEHVKRLTVFGDYMVEILEKESKKPDSHIFRKN*