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SCNpilot_expt_500_bf_scaffold_5538_13

Organism: SCNPILOT_EXPT_750_P_Alphaproteobacteria_novel_39_47

near complete RP 46 / 55 MC: 1 BSCG 47 / 51 MC: 4 ASCG 10 / 38 MC: 2
Location: comp(12339..12476)

Top 3 Functional Annotations

Value Algorithm Source
Excinuclease ABC subunit C n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SDM2_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 64.4
  • Coverage: 45.0
  • Bit_score: 67
  • Evalue 3.90e-09
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 45.0
  • Bit_score: 92
  • Evalue 1.60e-16
uvrC; UvrABC system protein C; K03703 excinuclease ABC subunit C similarity KEGG
DB: KEGG
  • Identity: 66.7
  • Coverage: 45.0
  • Bit_score: 67
  • Evalue 1.60e-09

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Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 138
GGGGCACATCGTAAAAAATCTTTACTGCGCCATTTTGGTTCAACACGAGAGGTTGCGCGGGCTGGTATTGAAGATTTACAATCCGTAAAAGGAATTAGTGCAAGTTTAGCTCAAAAAATATATGATTATTTTCATTAG
PROTEIN sequence
Length: 46
GAHRKKSLLRHFGSTREVARAGIEDLQSVKGISASLAQKIYDYFH*