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SCNpilot_expt_500_bf_scaffold_3224_32

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_67_36

partial RP 33 / 55 BSCG 33 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: 26138..27382

Top 3 Functional Annotations

Value Algorithm Source
secretion protein HlyD n=1 Tax=Sphingomonas elodea RepID=UPI000263219C similarity UNIREF
DB: UNIREF100
  • Identity: 63.1
  • Coverage: 390.0
  • Bit_score: 482
  • Evalue 4.60e-133
  • rbh
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EZP49022.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.8
  • Coverage: 416.0
  • Bit_score: 413
  • Evalue 4.80e-112
HlyD family heavy metal efflux protein; K15727 cobalt-zinc-cadmium resistance protein CzcB similarity KEGG
DB: KEGG
  • Identity: 41.1
  • Coverage: 406.0
  • Bit_score: 269
  • Evalue 1.50e-69

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Taxonomy

Sphingomonas sp. RIT328 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1245
GTGACCGACAATCTGGCTTCCTCGTCACCACTTCCACCCGCCCGAGCGATCGGCCGCGCTGCGCAGCTGCGCCTCGTCGCGCTGGCCGCCGCGGCGCTGGTGGCGGTGCTGCTGCTGATCGCCGGCGCGCGGGCGCTGTTCACGTCCCCGCCGCCGGCAACGCCGACACTGCCGACGGGCGCGTTCAGACCGACGCCGGAGCAACTGGCGCAGCTCACCATCGCGCCGGTGACGAGCGGGGCGGATGCCCAGCTCGTGCGCGCGAGCGGTGCGATCGCGGTGGACGGGGATCGCAGCACGCCCGTCCTGCTGCCGTTCTCGGGGCAGGTGCTGGCGGTTTATGTTGAGCCGGGGCGGCGGGTGGTGAAGGGGCAGCCGTTGCTGCGCATCGCATCGCCCGAGATGGTCGATGCGCGCAACGCGCTAGCGACGGCGGCGGCGCAGCGCGCGACGGCGGCGGAGGCGCTGCGCGTCGCCACGGCCACCGCCGCCCGGCAGAAGGCGATCTATGAAACCGCCGGCGGCGCGCTGAAGGACTATACTCAGTCGCAGGCCGATCTGGTCGCGGCGCAATCGGCGCTGCGCACGGCCGAATCGGCGGAACGGGCGGCGCGCAACCATGTCGCGATCTTCGGCAGCAGCGGGGAAGGCGGGGGACCGGCGGGGCAGCCCGCCACCGTCTATCGCGCGCCGGTCGCCGGGCTGATCGCCGATCGCAACGTCGCGCCGGGCCAGTTCGTCACCGCGGGCGGCACCGCGCCGCTGCTGACGATCACCGATCCCTCGCGGGTATGGCTCGTCGCGCAACTGGCGGAGAGCGATGCCGCCGTCGTCCGCGTCGGCGACCAGGTGCGGGTGACGACGCCCGCGCTGCCCGGCCGCACCTTCGCCGCGCGAATCGACAATGTCGGCGCGGCGCTCGATCCGAACAGCCACCGCCTGCCGGTCCGCGCATCGATCGACAACCCGGACGGCGCGCTCAAGCCGCAGATGTTCGCCTCCTTCACCATCACCCGGCGAACCGGCGGCGGCGACGCCGTGATGGTGCCGGCGTCGGCGGTGATCCATGAGGGCGACAGCGCCCGCGTGTGGGTGGAGGGGCGCGACCGGCTGCTCTACGCCCGCCCCGTCACCACCGGGCCGAGCGAAGGCGGCTTCACCCGCATCCTCGCCGGTCTCCGGCCCGGCGACCGGGTCGTCACCAGGGGCGCGCTGTTCGTCAACGAGGCGGGCCTCGATCAATGA
PROTEIN sequence
Length: 415
VTDNLASSSPLPPARAIGRAAQLRLVALAAAALVAVLLLIAGARALFTSPPPATPTLPTGAFRPTPEQLAQLTIAPVTSGADAQLVRASGAIAVDGDRSTPVLLPFSGQVLAVYVEPGRRVVKGQPLLRIASPEMVDARNALATAAAQRATAAEALRVATATAARQKAIYETAGGALKDYTQSQADLVAAQSALRTAESAERAARNHVAIFGSSGEGGGPAGQPATVYRAPVAGLIADRNVAPGQFVTAGGTAPLLTITDPSRVWLVAQLAESDAAVVRVGDQVRVTTPALPGRTFAARIDNVGAALDPNSHRLPVRASIDNPDGALKPQMFASFTITRRTGGGDAVMVPASAVIHEGDSARVWVEGRDRLLYARPVTTGPSEGGFTRILAGLRPGDRVVTRGALFVNEAGLDQ*