ggKbase home page

SCNpilot_expt_500_bf_scaffold_12358_1

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_67_36

partial RP 33 / 55 BSCG 33 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: 1..702

Top 3 Functional Annotations

Value Algorithm Source
ligC; 4-carboxy-2-hydroxymuconate-6-semialdehyde dehydrogenase; K10219 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase [EC:1.1.1.312] similarity KEGG
DB: KEGG
  • Identity: 87.4
  • Coverage: 230.0
  • Bit_score: 426
  • Evalue 6.90e-117
4-carboxy-2-hydroxymuconate-6-semialdehyde dehydrogenase {ECO:0000313|EMBL:BAK65924.1}; EC=1.1.1.312 {ECO:0000313|EMBL:BAK65924.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.4
  • Coverage: 230.0
  • Bit_score: 426
  • Evalue 3.10e-116
oxidoreductase n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B7A232 similarity UNIREF
DB: UNIREF100
  • Identity: 93.1
  • Coverage: 232.0
  • Bit_score: 450
  • Evalue 1.10e-123

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingobium sp. SYK-6 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 702
TGCATGGACGCGGGCAAGCATGTGCAGGTCGAGATCCCCCTCGCCGACAGCCTCGCCGACGCGGAGGCGGTGCTCGCGAAGAGTCGGGAGACCGGCCGCGTCTGCATGGTCGGCCACACGCGGCGCTTCAATCCGTCGCACCAATGGCTCCACAAGCGCATCGCGGCGGGCGAGATCGCGGTGCAGCAGATGGACGTGCAGACCTATTTCTTTCGCCGCAGGAACATCAACGCCAAGGGCGAGCCGCGGAGCTGGACCGATCACCTGCTGTGGCACCACGCCGCGCATACCGTGGACCTGTTCGCCTATCAGGCCGGCCCGATCGTCAAGGCCAATGCGATCGAGGGGCCGATCCACCCGGAACTGGGCATCGCGATGGACATGTCGATCCAGCTCAAGGCGGAGAGCGGCGCGATCTGCACGCTATCGCTGTCGTTCAACAACGACGGGCCGCTCGGCACCTTCTTCCGCTACATCTGCGACAACGGGACATGGATCGCGCGCTACGACGATCTGGTGACGGGGCGCGAGGAACCGGTGGACGTCTCCACGGTGGACGTGTCGATGAACGGCATCGAGTTGCAGGACCGCGAGTTCGTCGCCGCGATCCGCGAGGGACGCGAGCCGAACAGCTCGGTCGCGCAGGTGATGCCCTGCTATCGCGTGCTGGGCGCGCTGGAACAGCAGCTCGCGGGGGCGTGA
PROTEIN sequence
Length: 234
CMDAGKHVQVEIPLADSLADAEAVLAKSRETGRVCMVGHTRRFNPSHQWLHKRIAAGEIAVQQMDVQTYFFRRRNINAKGEPRSWTDHLLWHHAAHTVDLFAYQAGPIVKANAIEGPIHPELGIAMDMSIQLKAESGAICTLSLSFNNDGPLGTFFRYICDNGTWIARYDDLVTGREEPVDVSTVDVSMNGIELQDREFVAAIREGREPNSSVAQVMPCYRVLGALEQQLAGA*