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SCNpilot_expt_500_bf_scaffold_2226_2

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

near complete RP 42 / 55 MC: 1 BSCG 44 / 51 MC: 6 ASCG 14 / 38 MC: 4
Location: 642..839

Top 3 Functional Annotations

Value Algorithm Source
Branched-chain amino acid permease n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UC46_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 95.4
  • Coverage: 65.0
  • Bit_score: 128
  • Evalue 2.70e-27
Branched-chain amino acid permease {ECO:0000313|EMBL:ENN87723.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.4
  • Coverage: 65.0
  • Bit_score: 128
  • Evalue 3.70e-27
AzlC family protein similarity KEGG
DB: KEGG
  • Identity: 93.8
  • Coverage: 65.0
  • Bit_score: 126
  • Evalue 3.20e-27

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Taxonomy

Rhizobium freirei → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 198
ATGGGCTTTCGCACGCGCGATAATTTCCTACCTGTCGTGGCGGCCAGCGCCGTGGCATCGGCCATCGCGTATCGTTATGTCGGTTCGCCCTGGCATGTCAGCATCGGCGCGCTCGCCGGCGTCGCTCTTGCAGCGATACTGCCGCCGGTGAAAGCGAACCGCAAACCTGATATCGCGCACGAAAACCACGAGGTCTGA
PROTEIN sequence
Length: 66
MGFRTRDNFLPVVAASAVASAIAYRYVGSPWHVSIGALAGVALAAILPPVKANRKPDIAHENHEV*