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SCNpilot_expt_500_bf_scaffold_4482_29

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

near complete RP 42 / 55 MC: 1 BSCG 44 / 51 MC: 6 ASCG 14 / 38 MC: 4
Location: comp(21965..22177)

Top 3 Functional Annotations

Value Algorithm Source
Cold-shock protein CspG n=2 Tax=Rhizobium RepID=L0LJQ7_RHITR similarity UNIREF
DB: UNIREF100
  • Identity: 98.6
  • Coverage: 70.0
  • Bit_score: 143
  • Evalue 1.10e-31
cspG1; cold-shock protein CspG similarity KEGG
DB: KEGG
  • Identity: 98.6
  • Coverage: 70.0
  • Bit_score: 143
  • Evalue 3.50e-32
Putative cold shock-like transcription regulator protein CspC {ECO:0000313|EMBL:ENN89306.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.6
  • Coverage: 70.0
  • Bit_score: 143
  • Evalue 1.60e-31

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Taxonomy

Rhizobium freirei → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 213
ATGGCCACCAAGGGCACCGTAAAATTCTTCAACCAGGACAAGGGTTTTGGTTTCATCACTCCTGACGGCGGCGCGAAGGACGCATTCGTCCACATCTCCGCTCTTCAGGCTTCCGGCATCCAGTCGCTGCGCGAAGGCCAGCAGGTTACCTTCGACACCGAGCCGGATCGCATGGGCAAGGGCCCGAAGGCCGTCAACATCCAGGCTAACTAA
PROTEIN sequence
Length: 71
MATKGTVKFFNQDKGFGFITPDGGAKDAFVHISALQASGIQSLREGQQVTFDTEPDRMGKGPKAVNIQAN*