ggKbase home page

SCNpilot_expt_500_bf_scaffold_4119_11

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

near complete RP 42 / 55 MC: 1 BSCG 44 / 51 MC: 6 ASCG 14 / 38 MC: 4
Location: comp(11550..11759)

Top 3 Functional Annotations

Value Algorithm Source
Cold shock protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V2G5_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 97.1
  • Coverage: 69.0
  • Bit_score: 138
  • Evalue 3.60e-30
Cold shock protein {ECO:0000313|EMBL:ENN87256.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.1
  • Coverage: 69.0
  • Bit_score: 138
  • Evalue 5.00e-30
cspA1; cold shock protein; K03704 cold shock protein (beta-ribbon, CspA family) similarity KEGG
DB: KEGG
  • Identity: 95.7
  • Coverage: 69.0
  • Bit_score: 136
  • Evalue 2.50e-30

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium freirei → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 210
ATGAGCACAGGTACTGTAAAGTGGTTCAATGCAGCCAAGGGTTTTGGCTTTATTCAGCCCGACGACGGCGCGACGGATGTTTTCGTGCATATTTCGGCCGTTGAGCGCGCCGGCATGAGCACGCTGCGCGACGGTCAGAAGATTTCTTACGAGCTGGTCAAAGACAAGCGTTCGGGCAAGATGTCGGCTGATCAGCTGGAAGCCATGTAA
PROTEIN sequence
Length: 70
MSTGTVKWFNAAKGFGFIQPDDGATDVFVHISAVERAGMSTLRDGQKISYELVKDKRSGKMSADQLEAM*