ggKbase home page

SCNpilot_expt_500_bf_scaffold_5959_6

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

near complete RP 42 / 55 MC: 1 BSCG 44 / 51 MC: 6 ASCG 14 / 38 MC: 4
Location: comp(4155..5123)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LUY2_RHITR similarity UNIREF
DB: UNIREF100
  • Identity: 93.5
  • Coverage: 322.0
  • Bit_score: 588
  • Evalue 4.60e-165
  • rbh
transcriptional regulator, LysR family similarity KEGG
DB: KEGG
  • Identity: 93.5
  • Coverage: 322.0
  • Bit_score: 588
  • Evalue 1.40e-165
  • rbh
Transcriptional regulator {ECO:0000313|EMBL:EJK78150.1}; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.2
  • Coverage: 322.0
  • Bit_score: 588
  • Evalue 6.50e-165

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium sp. AP16 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 969
ATGCTGCATTCAAGACGGCTTCTCTACATCCATGAAATCGCTCGCTGCGGCTCGATCCGCAAGGCGGCGGCACGGCTCAATGTGGCCTCGTCGGCGATCAACCGACAGATCCTCGCGCTGGAAGAGGAAATGGGTGCGCCGCTCTTCGAGCGCCTGCCGCGCGGGTTGCGACTGACGGCGGCGGGAGAGCTCTGCATCGAGCACATTCGCGAAGTTCTCAAAAATTACGAGCGGCTGGAGGGCCGCATTCGCAGCCTCAAGATGCAGCAGGCCGGTAAGGTCAGGATGGTTGCGACGGTCGGGCTTACTGGCGGTCCCTTGCCCGAGATCATCGCGCGCTTTCTCTCCGAACATCCAAGGGGCTTCATCCAGCTGCGCAACGATGCCGGCTCGACGACCATTGCGCCGGTGGTGTCGGGCGAAGTCGATATCGGACTTGGTTTCAACATACCCGCGACACCTGGTATCCGTTCCCTCGGCAATTTCGATATACCAATCGGCGTCGTGCTGCCGCCCGGCCACCCTCTAATCGGACCGGGGCCGATCAACCTTGCGGATGTGGTCGAGGAGCGGCTGCTGCTGGCGCAGCCCGGCACCAGCCTTAGGGACGTCATCAATCTGACGCTGGCACGTCTTTCGGTCCAGGTCGAGCCTGTGCTGGAGAGCAATGCGTCGGAAATGCTGAAGCAGATGGTCAAATGCGGCGCCGGGCTGACGCTGCTCAATCCGCTTGACGTCATTACGGAATGTCGGCGTGGCGAGCTGGTGTTCCGGCCGATCGCCGAGCCGCATTCACGGCCTCAGCCGATGAAGCTCTTTGCCCGCACGCGCGCACCGCTCGATGCTGCCACCAGCCTCTTTGTCGAATACCTGCTCGCGGAATTGGCCGGGATCGTCGAGGAACTGCAGGGGAAGGGGCATATCATCCCGTTCTCCGAGCGACGACGCGCGGACGCCTATTTCGAATAG
PROTEIN sequence
Length: 323
MLHSRRLLYIHEIARCGSIRKAAARLNVASSAINRQILALEEEMGAPLFERLPRGLRLTAAGELCIEHIREVLKNYERLEGRIRSLKMQQAGKVRMVATVGLTGGPLPEIIARFLSEHPRGFIQLRNDAGSTTIAPVVSGEVDIGLGFNIPATPGIRSLGNFDIPIGVVLPPGHPLIGPGPINLADVVEERLLLAQPGTSLRDVINLTLARLSVQVEPVLESNASEMLKQMVKCGAGLTLLNPLDVITECRRGELVFRPIAEPHSRPQPMKLFARTRAPLDAATSLFVEYLLAELAGIVEELQGKGHIIPFSERRRADAYFE*