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SCNpilot_expt_500_bf_scaffold_8805_17

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

near complete RP 42 / 55 MC: 1 BSCG 44 / 51 MC: 6 ASCG 14 / 38 MC: 4
Location: 15555..15971

Top 3 Functional Annotations

Value Algorithm Source
ABC-type spermidine/putrescine transport system, ATPase component n=1 Tax=Rhizobium sp. AP16 RepID=J2D3N7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 87.1
  • Coverage: 139.0
  • Bit_score: 244
  • Evalue 7.00e-62
ABC transporter; K02052 putative spermidine/putrescine transport system ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 87.1
  • Coverage: 139.0
  • Bit_score: 244
  • Evalue 2.20e-62
ABC transporter {ECO:0000313|EMBL:ACM27092.1}; TaxID=311403 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter (strain K84 / ATCC BAA-868).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.1
  • Coverage: 139.0
  • Bit_score: 244
  • Evalue 9.80e-62

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 417
ATGGCTTTTCTCGACCTGATCAACATTAGCAAGTCATTTGGAGTTCAATCCGTCGTCGAGGAATTCACCGTCCAAATCGAGAAGGGAGAATTCATCTCCTTCCTCGGACCGTCGGGTGGCGGCAAGACGACCGTGCTGCGCATGATCGCCGGTTTCGAACCCCCGACCGCCGGCAATCTGTCGATCAACGGCAAGGATCAGCGGCCGCTGAAGCCGAACCAGCGCAATATCGGCATGGTCTTCCAGGCCTACGCACTGTTTCCGAACATGACGGTGCACGACAACGTCGCCTTCGGCCTCAAGGTTGCCGGCATGGCAAAGCCCGACATCGACAAGCGCGTGAAGGAGATGCTTGCTCTCATCAAGCTCGATCATCTTGCCGCCCGCTATCCGTATCAGATGTCCGGCGGCCAGCAG
PROTEIN sequence
Length: 139
MAFLDLINISKSFGVQSVVEEFTVQIEKGEFISFLGPSGGGKTTVLRMIAGFEPPTAGNLSINGKDQRPLKPNQRNIGMVFQAYALFPNMTVHDNVAFGLKVAGMAKPDIDKRVKEMLALIKLDHLAARYPYQMSGGQQ