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SCNpilot_expt_500_bf_scaffold_12410_2

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

near complete RP 42 / 55 MC: 1 BSCG 44 / 51 MC: 6 ASCG 14 / 38 MC: 4
Location: 2806..3801

Top 3 Functional Annotations

Value Algorithm Source
LacI family transcriptional regulator n=1 Tax=Rhizobium leguminosarum RepID=UPI00037849F8 similarity UNIREF
DB: UNIREF100
  • Identity: 88.5
  • Coverage: 331.0
  • Bit_score: 580
  • Evalue 9.90e-163
  • rbh
Transcriptional regulator, LacI family {ECO:0000313|EMBL:CDP50039.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.8
  • Coverage: 334.0
  • Bit_score: 340
  • Evalue 3.10e-90
transcriptional regulator LacI family similarity KEGG
DB: KEGG
  • Identity: 45.0
  • Coverage: 338.0
  • Bit_score: 270
  • Evalue 5.30e-70

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Taxonomy

Devosia sp. DDB001 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 996
ATGTCCGATATCGCCTCGCAGGTCGGCGTCTCGCATGCGACGGTTTCCCTGGTGTTGAATGAGGCACCCGGCAAGAGAGTTTCGGAGAAGGTACGCGAGCGGGTGTTGGCGGTCGCCGAGGAACTTGGCTACCAGAAGACCGTGCCGGCCAACGATCCGATCGGTGGGATCATCGTGCTCCTGATCGATGATCTCATGGCCTCGCAGCATGCCGCGCCACTGATCGAGGGCGTTCGAAGCGCTGCGGAAGAGCAGGGGCTGGCGGCTCTTACCGTCGTCACCGGCGGACAGATCGAATTTGCTGAATCCATCCTGGATTATCTCGGACGGCGCCAGATTGTCGGCGTAATCTACGCGACGCTCATTACCCAGCTCGTGCCCGTGCTACCCTCGAAGCTCGGCAACCATCCGACCGTCCTGCTGAACTGCCACCAGCAGCGCGCCGAGTTCTCGTCAATCATTCCGGGCGATCATGCCGGTGGCTATGCGGCAACAGAGGCCTTGATCAAGGCCGGCCATCGCCGCATCGCCATGATCGATGCAGGCAGACAGAGACTGGAGGCGGCTCGGGACCGCCTGAGCGGTTATCGCCAGGCGCTGACGACCTACGATATCGCCGTCGATCCGGAATTAATCCTTTCGGAAGCCTGGTCGCTCGATCTCGGTCGGAAAAAAATGTTGCAGCTTCTCGATCTGCCGTCGCCGCCGACGGCGGTGTTCTGCTTTTCCGACCGCGTGGCGATGGGTGCTTATGATGCGATCAGAATGCGCGGGCTGAAAATCCCCGACGATATTTCCGTCGTCGGCTTTGACGATGAAAGCCTCGCCCGAAAAATCCTGCCGCCTCTTACAACATTGAAGCTGCCGCATGAGGAGATGGGTCGTTGGGCGGTCGCCGAGCTTATGGAAAAGGTGGCGCAGCCTAAAAAGCAGCCGGTGCGGTTGAAAATGGAGTGCCAGTTGATCCGACGCGGTTCGATTGCTCCACCACGTTAA
PROTEIN sequence
Length: 332
MSDIASQVGVSHATVSLVLNEAPGKRVSEKVRERVLAVAEELGYQKTVPANDPIGGIIVLLIDDLMASQHAAPLIEGVRSAAEEQGLAALTVVTGGQIEFAESILDYLGRRQIVGVIYATLITQLVPVLPSKLGNHPTVLLNCHQQRAEFSSIIPGDHAGGYAATEALIKAGHRRIAMIDAGRQRLEAARDRLSGYRQALTTYDIAVDPELILSEAWSLDLGRKKMLQLLDLPSPPTAVFCFSDRVAMGAYDAIRMRGLKIPDDISVVGFDDESLARKILPPLTTLKLPHEEMGRWAVAELMEKVAQPKKQPVRLKMECQLIRRGSIAPPR*