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SCNpilot_expt_500_bf_scaffold_14261_1

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

near complete RP 42 / 55 MC: 1 BSCG 44 / 51 MC: 6 ASCG 14 / 38 MC: 4
Location: 1..414

Top 3 Functional Annotations

Value Algorithm Source
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.3
  • Coverage: 136.0
  • Bit_score: 221
  • Evalue 8.90e-55
Triosephosphate isomerase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V430_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 85.3
  • Coverage: 136.0
  • Bit_score: 221
  • Evalue 6.30e-55
tpiA3; triose-phosphate isomerase similarity KEGG
DB: KEGG
  • Identity: 71.3
  • Coverage: 136.0
  • Bit_score: 187
  • Evalue 3.20e-45

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Taxonomy

Rhizobium freirei → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 414
AAGGCTGCCGCAGTCCACAAAGCAAGACTGGCGAGCATAATTTGCGTCGGAGAAACGCTAACAGAACGAAACGAGGGGAGGGCGGCTGAGGTGGTCTGTGCGCAGCTTGAAGGATCGATTCCCGACACCGCAACCAGTTCGAACACGATGATCGCCTATGAACCCGTATGGGCGATCGGTACTGGGCAGGTTCCGAGCCTTGCACAGATCGAGGAAATACACTCATCCATTCGGCAGATGCTCAAGGAGCGGCTGGGAGATGACGGAGGCCGGGTCAGGATCCTCTACGGCGGCTCGGTCAAGGCCCAGAACGCAAAGGCGATCTTTAGCGTTTCCAACGTCGATGGCGCTCTCGTCGGAGGGGCGTCGCTGAAGGCATCGGAGTTCGCCGGGATCATCCTGGCAGCCGACTGA
PROTEIN sequence
Length: 138
KAAAVHKARLASIICVGETLTERNEGRAAEVVCAQLEGSIPDTATSSNTMIAYEPVWAIGTGQVPSLAQIEEIHSSIRQMLKERLGDDGGRVRILYGGSVKAQNAKAIFSVSNVDGALVGGASLKASEFAGIILAAD*