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SCNpilot_expt_500_bf_scaffold_14261_6

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

near complete RP 42 / 55 MC: 1 BSCG 44 / 51 MC: 6 ASCG 14 / 38 MC: 4
Location: 3515..4423

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator LysR family n=2 Tax=Ketogulonicigenium vulgare RepID=E3F1M3_KETVY similarity UNIREF
DB: UNIREF100
  • Identity: 50.2
  • Coverage: 299.0
  • Bit_score: 287
  • Evalue 1.60e-74
Putative transcription regulator protein {ECO:0000313|EMBL:CDN94177.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.5
  • Coverage: 299.0
  • Bit_score: 378
  • Evalue 1.20e-101
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 50.2
  • Coverage: 299.0
  • Bit_score: 287
  • Evalue 5.00e-75

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 909
ATGGCTCATCATCCTGGCGACGAAATCGGTGTGTTCCTGGCGGTCTGTGAAAGTGGAAGCTTTTCCGCCGCCGCCGAGCGTCTGCGCCTGTCGCCATCCGCGGCTGCCAAGGCGGTGGGGCGTCTTGAAAACCGTCTGCGCATCAGACTGTTCCAAAGAACGACGAGGCGTCTCAACCTCACCCTGGAAGGCATCGTCTATCGGGATGTCTGCAGGCAGGCCCGAACAGACATTTCGAGGGCGGAGGCGGAGATCGCACATCTCAGGCAGGAGCCGTCCGGCAGGCTGGTCGTCAGTCTTCCTCCTTTGTTCGGGGCGAAGATCATCGCTCCGGCGCTATACGAGCTATGTAGGCGGTGGCCGGCACTCTCGCTGGAAATATCCAGCTCGACTGAGCCAGTGGACCTGCCTGGCGCCGGCATCGATCTCGCCGTTAGGATTGGAGACCTCCCTGACGTCAATGCACTGGTCGCACGGCCTCTAGGCACGCAGCACATAGTGCTCTGCGCCGCAACGGAATACATCCGGCGCCGGTCGATGCCGAACAGCGTCGAAGAGCTTGGAGGCCACGATCTGATTGCCACGTCTCAGAAAGGCAGAGCGAGAGCGTGGCATTTCCAGCAGCGCGATGGAAGCAAGACGATCTGGCATCCCAAGGCCAGACTTCTGCTTGATGGAGGGGTTCTGACGCTGGGCGCAATTCGCGAAGGCCAGGGGATCGGCCTCGTTCCACGCTGGCTCGTAGCGCACGATCTGGCCCACGGCCGACTGCTTCCGATCCTCGACGATCAAGTATCCGGACACCTTCCCATAAACGCGATCTGGCCTGCGTCCCCGATACTCCTTCCCCGACTGAGGGTCGCTATCGACGCAATCGTCGAGGCGACCGCACCACTGCGGACAGGATGA
PROTEIN sequence
Length: 303
MAHHPGDEIGVFLAVCESGSFSAAAERLRLSPSAAAKAVGRLENRLRIRLFQRTTRRLNLTLEGIVYRDVCRQARTDISRAEAEIAHLRQEPSGRLVVSLPPLFGAKIIAPALYELCRRWPALSLEISSSTEPVDLPGAGIDLAVRIGDLPDVNALVARPLGTQHIVLCAATEYIRRRSMPNSVEELGGHDLIATSQKGRARAWHFQQRDGSKTIWHPKARLLLDGGVLTLGAIREGQGIGLVPRWLVAHDLAHGRLLPILDDQVSGHLPINAIWPASPILLPRLRVAIDAIVEATAPLRTG*