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SCNpilot_expt_500_bf_scaffold_15097_1

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

near complete RP 42 / 55 MC: 1 BSCG 44 / 51 MC: 6 ASCG 14 / 38 MC: 4
Location: comp(2..580)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PCW8_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 193.0
  • Bit_score: 390
  • Evalue 1.10e-105
Uncharacterized protein {ECO:0000313|EMBL:EKS37450.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 193.0
  • Bit_score: 390
  • Evalue 1.50e-105
conjugal transfer protein TrbF; K03200 type IV secretion system protein VirB5 similarity KEGG
DB: KEGG
  • Identity: 93.8
  • Coverage: 193.0
  • Bit_score: 373
  • Evalue 3.30e-101

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 579
ATGTTCAAACGACCTTCCACGCATTACGGCAAAGCCCCCCAGCCCGAGACGCCCTATCAGCGCGCCGCTCAGGTCTGGGACGATCGTATCGGCTCCGCCCGCGTTCAGGCCCGCAACTGGCGCTACATGGCTTTCGGCTCGCTGGCGCTCGCGGGCGGGCTTTCGGCCGCGCTGGTCTGGCAGTCGGCCAACGGCTCGATCGTGCCCTGGGTGGTGCAGGTCGACCGGCTCGGTCAGGCGCAGGCGGTCGCGCCGGCGACCGCAGACTACCAGCCGAACGACCCGCAAATCGCCTTCTACCTCGCGCGCTTCATCGAGCAGGTCCGCTCGATCCCATCCGATGCCATCATCGTGCGGCAGAACTGGCTGCGCGCCTACGACTTCACGACACAGGGCGGCGCGCTCGCACTCAACGACTATGCTCGCGCCAACGACCCCTTCACCAAAGTCGGCAAGCAGCAGATCGCGATCGAGGTGTCGTCGGTCATCCGCGCCTCGCCATCGAGCTTCCGCATCGCCTGGATCGAGCGCCGCTATCAGGATGGCTCGCTGGCTTCCACCGAGCGCTGGTCCGCCATC
PROTEIN sequence
Length: 193
MFKRPSTHYGKAPQPETPYQRAAQVWDDRIGSARVQARNWRYMAFGSLALAGGLSAALVWQSANGSIVPWVVQVDRLGQAQAVAPATADYQPNDPQIAFYLARFIEQVRSIPSDAIIVRQNWLRAYDFTTQGGALALNDYARANDPFTKVGKQQIAIEVSSVIRASPSSFRIAWIERRYQDGSLASTERWSAI