ggKbase home page

SCNpilot_expt_500_bf_scaffold_3988_8

Organism: SCNPILOT_EXPT_750_P_Devosia_62_26

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 11 / 38 MC: 2
Location: 6343..6666

Top 3 Functional Annotations

Value Algorithm Source
Plasmid stabilization system n=1 Tax=Rhizobium freirei PRF 81 RepID=N6TZZ6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 40.2
  • Coverage: 92.0
  • Bit_score: 78
  • Evalue 5.20e-12
Toxin ParE1 {ECO:0000313|EMBL:KFC71712.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.4
  • Coverage: 97.0
  • Bit_score: 89
  • Evalue 3.10e-15
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 42.2
  • Coverage: 90.0
  • Bit_score: 72
  • Evalue 6.80e-11

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Devosia sp. LC5 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 324
ATGCGTTTCTCGCTGAACTACAAAGCCGTCATGCCCATGAGGGCTATTGACCTCAAGCCTTTGGCAAGAGAGGACTGGCGCGGCATCTGGGACCATGGAATAGAGAATTGGTCGGCAACGACGGCGAAAAGCTATTACAACCGGATTGCAAATCGTCTGGAAGACCTTGCAGTCGGCCAGCTCATTGGTCTTCCCGCCTATAACTATCCGGGCGTCCTGACGAGTCTGATCGGGTCTCATGCCATCTACTTCCGCATCGAGCCAAAGACCTTGACCGTCTTGCGAATTCTTCACCAAGGCATGGATGTCGGCAAAAACCTCTAA
PROTEIN sequence
Length: 108
MRFSLNYKAVMPMRAIDLKPLAREDWRGIWDHGIENWSATTAKSYYNRIANRLEDLAVGQLIGLPAYNYPGVLTSLIGSHAIYFRIEPKTLTVLRILHQGMDVGKNL*