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SCNpilot_expt_500_bf_scaffold_4245_12

Organism: SCNPILOT_EXPT_750_P_Devosia_62_26

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 11 / 38 MC: 2
Location: comp(9072..10028)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=2 Tax=Ketogulonicigenium vulgare RepID=E3F5I2_KETVY similarity UNIREF
DB: UNIREF100
  • Identity: 63.3
  • Coverage: 308.0
  • Bit_score: 390
  • Evalue 1.40e-105
  • rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:KFL32039.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.9
  • Coverage: 303.0
  • Bit_score: 451
  • Evalue 7.10e-124
pcaQ; Pca operon transcription factor PcaQ; K02623 LysR family transcriptional regulator, pca operon transcriptional activator similarity KEGG
DB: KEGG
  • Identity: 63.3
  • Coverage: 308.0
  • Bit_score: 390
  • Evalue 4.40e-106
  • rbh

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Taxonomy

Devosia riboflavina → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 957
ATGGCGCCGCGCATTATCGATCCCCGGATCAAGATCCGCCACATCGCCTGCTTTCTGGAAGTGGCGCGGTTGCGCAGTGTGGTCAATGCCGCCGACATGCTCAATATCAGCCAGCCGGCGGCCACCAAAACGATCCAGGAACTCGAGGAGGTGCTGGGTGGAGCGCTGTTCGACCGCAGCCGGCGCCGGCTGGCGCTGACCCCGTTCGGGGAGGTGTTTTACCGTTATGCCTCCACCTCTATTGCCGCGCTGCGACAGGGGATCGATGCGGCGCGTGGTGGCGAGGAGGCGGCGGTGGTCAAGATCGGCGCGCTGCCATCGGTATCGGCGCGCATCCTGCCCGAGGCGGTGCGCAAATTCTTCAAGGCCGAGCCGGGGATCAATAGTCGCATCGTCACCGGACCCAATTCCTACCTCTTGTCGCTGCTGCGTACCGGCGATGTCGATCTGGTCATCGGGCGCATGGCCGAGCCCGATTCCATGCTGGGGCTGAGTTTTGAGCATCTCTATTCCGAGCGTGTGGTGCTGGCGGTGCGCCCCGACCATCCCCTGCTGGGGGAGCGCGAATTCAACCTGGGCATGATCGACGGCTATCAGCGGCTGATGCCGACGCCCGGCTCGGTGATCCGGCCCCTGGTGCAGCGCATGCTGGTTGCCTATGGCATTGGCGGCCAGCACGAGGAGGTCGAGACGGTCTCCAACGCCTTTGGCAGGGCCTATATCAGGCAGAGCGATGCGGTGTGGTTCATCTCCGAGGGTGTAGTGGCCGACGATGTGGCCGAAAATTATCTCTATCTCCTGCCCGTCGACATGAGCGAGACGCAGGGGCCGGTCGGCTTTACCACCCGCGCCGACACCGTGCCTGGTTTTGCCACCACCGCCTTCATGCAGACGGTGCGCGAAGTGTCGGAAAATATGCGCGGCGCCGGGCCGGTCGCGTCGGCTGCGGGCGATTGA
PROTEIN sequence
Length: 319
MAPRIIDPRIKIRHIACFLEVARLRSVVNAADMLNISQPAATKTIQELEEVLGGALFDRSRRRLALTPFGEVFYRYASTSIAALRQGIDAARGGEEAAVVKIGALPSVSARILPEAVRKFFKAEPGINSRIVTGPNSYLLSLLRTGDVDLVIGRMAEPDSMLGLSFEHLYSERVVLAVRPDHPLLGEREFNLGMIDGYQRLMPTPGSVIRPLVQRMLVAYGIGGQHEEVETVSNAFGRAYIRQSDAVWFISEGVVADDVAENYLYLLPVDMSETQGPVGFTTRADTVPGFATTAFMQTVREVSENMRGAGPVASAAGD*