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SCNpilot_expt_500_bf_scaffold_4512_2

Organism: SCNPILOT_EXPT_750_P_Devosia_62_26

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 11 / 38 MC: 2
Location: 206..2005

Top 3 Functional Annotations

Value Algorithm Source
GntR family transcriptional regulator n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B5D5D1 similarity UNIREF
DB: UNIREF100
  • Identity: 41.0
  • Coverage: 227.0
  • Bit_score: 161
  • Evalue 3.40e-36
Bacterial regulatory s, gntR family protein {ECO:0000313|EMBL:EZP49922.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 38.3
  • Coverage: 248.0
  • Bit_score: 162
  • Evalue 2.10e-36
GntR domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 39.0
  • Coverage: 246.0
  • Bit_score: 160
  • Evalue 1.80e-36

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Taxonomy

Sphingomonas sp. RIT328 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1800
ATGGCACTATTAATCAGCAGGACCAGCCTGGGCGGCACCGACGCCCGGGTGACCAACGACCTCGCCGCGGCACTGGACCGAGTCAACCTGGCGGTCACGCATGTCATTGACGACACCGTGATGAGCGTGCCGGACTATCGCGCCTGGTTCGATGAGTATGCTGCGCTCATCGTTCCAGCTTCGGCCCGGCCCGCAATGCGGACCGAAGACCGGGAAGCCGGCAGTGCCAAAGCGCGGGTCGCCGTTCGCGTCTACGAGCCGGCTTCGGTTGGGGCCATCATGGTCTTTGCCCATGGTGGCGCCTGGTTGATGGGCAATGTGGAAACCCACGACCATATCTGCCGCTGGCTGGCCCAGCATTGCGGCATCAGGGTGATATCGGTGGACTATGCCCTCGCCCCCGAGAGGCCGGCACCCTATGCGATAGAACAGGTGGCAGGGGTCATCGAAGAGTTGCTCGCAGACACCGGCCTGCCCGTATTCACCGCCGGTGACAGCGCCGGCGCGCAGATCATGAGCCTGGCCCTTTTGCGTCTCGACCCTGCCCTGCGGGCGCGGATTGCAGGTTTCATTTCCATTTACGGTGCCTATTCGCCGCGCATGAACCTGTCGTCGCACATCTTGTTCGGCGATGGACGCTTCGGGCTGTCGAGAAAGCAGATGTCCTGGGCCTGGAACCTCTACGCCCCGCATCTGTCGGTCGAAGAGCGCGACAGCCTCACCCCGCTGGCGCTGGATCTCGCCGACTTCCCGCCGACCCTCTGCATCGGCGCCGAATGCGACCCGCTGCTCGACGATACGCTGGCTCTTTACTCAGGTCTCGCCCGCGCCGGCCGGGATGTGACCCTGTCGCTATGGGCGGGCATCAACCATGGTGCACTGCATTTCGTCGGCTTTGTCGACAGCGTCACTGCCGCGGCCCAGTCAATCGTCCAATATATCCGCTCGCGCATTCCCGGCAGTTTCGAGCATATGGGCGGCGGCCGAGACATCGAAGCCATTGCCGTGGACGAGTTGGTGCAATTGCCCATGCTCATGGGCAATTTCCATGGCCTTCACCGCATCGAAACCCCACACCTGACCTCGCGCACCAGACGGCACGGCACCCTTGCCCATAGCATCGGACGCGATATCGTCGCTGGCAAATACCCGCCGGGCACCTTGCTCGATCCGGAGCAAGGCGACGGTGAGGACCTTTCGGTGTCACGCGGCTCATATCGTGAAGCCATGCGAACCCTTGCGGCCAAGGGGCTGATCACTGCCGCGCCGCGTGCGGGCACCCGCGTGGCCCCGCGTGCGTCCTGGCGCCTGCTCGACCCCGATGTCTTGGCCTGGCTGTTCGAAGGCGGCCTCGACGAGCACGTATTGCGCGAGGCCTTCGAGTTCCGCAAGGTCGTCGAACCCAGCGCCGCAGCCCTGACCGCCACCCGCTCCACGGCTGCGCTACGCGCGGCACTTGCCGAGGCCGTGCTGGCCATCACCGAAGGCACGCCCGACGACAGCGCCTGGGGCGAGGGGGTGGTGCGCTTCCACGAACTGATGCTGCAGGGCAGCGATAACGAAATCCTCGCCGCCACCTGGCCCTCCATACAGGTGGTCGTCAGCTGGAGCGTCGCCCTCGCCACAGCCGCGGGTCGGCACAGCATGGCGCGTGACCGGGCCGGCGACTATGCCAGCCTGCTCGACAAGATCACGCTTCGCGATGCCTCCGGCGCCATGATCGCCATGGCCCGCCTCATCGATGGCGCCATGTCCGATGTTTTGGTCCTGCTCGGCTCCCAACAGCGTCGCGAGGGTTAG
PROTEIN sequence
Length: 600
MALLISRTSLGGTDARVTNDLAAALDRVNLAVTHVIDDTVMSVPDYRAWFDEYAALIVPASARPAMRTEDREAGSAKARVAVRVYEPASVGAIMVFAHGGAWLMGNVETHDHICRWLAQHCGIRVISVDYALAPERPAPYAIEQVAGVIEELLADTGLPVFTAGDSAGAQIMSLALLRLDPALRARIAGFISIYGAYSPRMNLSSHILFGDGRFGLSRKQMSWAWNLYAPHLSVEERDSLTPLALDLADFPPTLCIGAECDPLLDDTLALYSGLARAGRDVTLSLWAGINHGALHFVGFVDSVTAAAQSIVQYIRSRIPGSFEHMGGGRDIEAIAVDELVQLPMLMGNFHGLHRIETPHLTSRTRRHGTLAHSIGRDIVAGKYPPGTLLDPEQGDGEDLSVSRGSYREAMRTLAAKGLITAAPRAGTRVAPRASWRLLDPDVLAWLFEGGLDEHVLREAFEFRKVVEPSAAALTATRSTAALRAALAEAVLAITEGTPDDSAWGEGVVRFHELMLQGSDNEILAATWPSIQVVVSWSVALATAAGRHSMARDRAGDYASLLDKITLRDASGAMIAMARLIDGAMSDVLVLLGSQQRREG*