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SCNpilot_expt_500_bf_scaffold_8118_4

Organism: SCNPILOT_EXPT_750_P_Devosia_62_26

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 11 / 38 MC: 2
Location: comp(3222..3704)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis similarity UNIPROT
DB: UniProtKB
  • Identity: 84.4
  • Coverage: 160.0
  • Bit_score: 281
  • Evalue 8.40e-73
50S m3Psi1915 methyltransferase RlmH; K00783 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] similarity KEGG
DB: KEGG
  • Identity: 68.3
  • Coverage: 161.0
  • Bit_score: 221
  • Evalue 1.80e-55
Ribosomal RNA large subunit methyltransferase H n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RH06_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 68.3
  • Coverage: 161.0
  • Bit_score: 221
  • Evalue 5.60e-55

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Taxonomy

Devosia chinhatensis → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 483
ATGCGCATTGCCATTGCGGCCGTGGGCCGGATGAAGAACGGGCCGGAGCGCGAGCTCGTGGCCCGTTATCTTGAGCGGGCCAGCGGCACCGGCAAGCCCCTGGCGCTGACCGGCTTTGACGTCTTCGAGATGAGCGAAAGCCGCGCCGGTTCCGCCGCGTCCCGAAAAGCCGAGGAAGCCAAGGCCATTCGCGCCGCCCTGCCGGACGGTCTCCTCGTCACTCTCGACGAACGCGGCAAATCCATCACCTCGGACGCCTTTGCCACCCAGCTCGGTCGCTGGCGCGATGATGGCCGCGCCGCTATCGGCTTTGTGATCGGGGGCGCCGACGGCATCGACCCCGACCTGGTGCGTCAGGCCGATCTCAGCATCAGCTTTTCCCCCATGGTCTGGCCGCACCAATTGGTGCGCATCATGCTGGCCGAGCAGCTTTATCGTGCCACCACCATTCTGTCGGGCCACCCCTATCACCGGGGCGACTGA
PROTEIN sequence
Length: 161
MRIAIAAVGRMKNGPERELVARYLERASGTGKPLALTGFDVFEMSESRAGSAASRKAEEAKAIRAALPDGLLVTLDERGKSITSDAFATQLGRWRDDGRAAIGFVIGGADGIDPDLVRQADLSISFSPMVWPHQLVRIMLAEQLYRATTILSGHPYHRGD*