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SCNpilot_expt_500_bf_scaffold_18656_1

Organism: SCNPILOT_EXPT_750_P_Devosia_62_26

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 11 / 38 MC: 2
Location: comp(2..202)

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretory pathway VirD4 component n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SUP5_NITWN similarity UNIREF
DB: UNIREF100
  • Identity: 77.4
  • Coverage: 62.0
  • Bit_score: 103
  • Evalue 7.10e-20
type IV secretory pathway VirD4 components; K03205 type IV secretion system protein VirD4 similarity KEGG
DB: KEGG
  • Identity: 77.4
  • Coverage: 62.0
  • Bit_score: 103
  • Evalue 2.20e-20
Type IV secretory pathway VirD4 component {ECO:0000313|EMBL:ABA03996.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.4
  • Coverage: 62.0
  • Bit_score: 103
  • Evalue 1.00e-19

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Taxonomy

Nitrobacter winogradskyi → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 201
ATGAAGCATCCCAGCGAATACAAAAATCTACGCAAAGGTATTGAGCTCGGCTTCTTTAACAAGAAGCCGATTGTCTATGGCGGCACCGAACCTGTCGCCATTGATGCGCAGGCGGGCAAAGGCAAGCTCACACGGTTCCTCGGTGTCACCCTGGTCTCACCGCGCCCGGCGCATCTGACCAAAATCATCACTGATCCGAAA
PROTEIN sequence
Length: 67
MKHPSEYKNLRKGIELGFFNKKPIVYGGTEPVAIDAQAGKGKLTRFLGVTLVSPRPAHLTKIITDPK