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SCNpilot_expt_500_bf_scaffold_11683_5

Organism: SCNPILOT_CONT_500_P_Rhizobiales_62_14

partial RP 39 / 55 MC: 1 BSCG 38 / 51 MC: 3 ASCG 8 / 38
Location: 2498..2959

Top 3 Functional Annotations

Value Algorithm Source
Putative GAF sensor protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QG68_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 54.0
  • Coverage: 150.0
  • Bit_score: 156
  • Evalue 2.10e-35
Histidine kinase {ECO:0000313|EMBL:ETR74910.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.4
  • Coverage: 148.0
  • Bit_score: 164
  • Evalue 1.10e-37
GAF sensor protein similarity KEGG
DB: KEGG
  • Identity: 54.0
  • Coverage: 150.0
  • Bit_score: 156
  • Evalue 6.70e-36

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Taxonomy

Afipia sp. P52-10 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 462
ATGGTCGATCAGCCGCCGTCGCTCTCACGCCATCTCGGCTTGGGTGAACGCATAGAGTCGGCGGCAGCAAACGCCAGTCCCGTCGATCCGGTACGGGTTGCAGCAATCCTGGTGTCCGCCGCAATCATTCTCGCGGCGTTGTATTATGGGCGCGACATCCTCGTTCCGCTGGCATTGGCCTTCCTGCTTAGCTTTGCCCTCAATCCGGCTGTGACACGTCTAAGGCGTCTGGGTCTGCCACAGATCGTGGCGGTGATCACCGTTATGACGGTGGTGTTTTGCGTCCTCGCTGGATTCGCACTCATTCTCGGATCGCAGGTGCGCACTCTCAGCGTGGAGTTGCCGAACTACCAATCTACCATGCGGACCAAGCTCGCTTCTTTGCGCGAGAGCTTGAATGCGCCCGGCATGTTCGACGGTGCGTTGAAAACGATCGATACCCTGCAAAAGGAAGTCGAGGAA
PROTEIN sequence
Length: 154
MVDQPPSLSRHLGLGERIESAAANASPVDPVRVAAILVSAAIILAALYYGRDILVPLALAFLLSFALNPAVTRLRRLGLPQIVAVITVMTVVFCVLAGFALILGSQVRTLSVELPNYQSTMRTKLASLRESLNAPGMFDGALKTIDTLQKEVEE