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SCNpilot_expt_500_bf_scaffold_13023_2

Organism: SCNPILOT_CONT_500_P_Rhizobiales_62_14

partial RP 39 / 55 MC: 1 BSCG 38 / 51 MC: 3 ASCG 8 / 38
Location: comp(893..2812)

Top 3 Functional Annotations

Value Algorithm Source
Carbohydrate-selective porin OprB n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QR33_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 73.6
  • Coverage: 656.0
  • Bit_score: 981
  • Evalue 4.80e-283
  • rbh
carbohydrate-selective porin OprB similarity KEGG
DB: KEGG
  • Identity: 73.6
  • Coverage: 656.0
  • Bit_score: 981
  • Evalue 1.50e-283
  • rbh
Carbohydrate-selective porin OprB {ECO:0000313|EMBL:ABE61314.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.6
  • Coverage: 656.0
  • Bit_score: 981
  • Evalue 6.80e-283

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Taxonomy

Nitrobacter hamburgensis → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1920
ATGGGCAACTTCATGAAACCCGTCTGGATGGCAATGAGCGCTGGCTTCTGCGCGCTGGGCGGGGTTGCCACGGCCGCCGATCTGCCTGCTGCGCTCCCCGTCAAAGCTCCCGTGCCATACACCAGGCTGCTCGATCCGACCTTCAGCGCTGCTGACAACCGCTTCGGTGGCATGATCGGCGGCTTGCAGGCCGGATACAATGTCGCGCTGCCTTCAGGATTGCTGTTAGGCATCGAGGCGGACCTGTCGTTCCCGAACTACATCGACTCCAATGCCGTTGTCGCAACGCTCGCCACGCGCCGATCAGACATCCTGCAAAAGCTCGATTATTCCGGCACCGCGCGCGCTCGGATCGGCTACGCCAGCGGTCCCTGGTTGGCTTACGCGACTGGCGGGCTCGCATGGGCAAGCGGACGTTTCATCGACACGCAGCCGGACGGCAGCGCGGACAAGCATCTCGACACACGTCTTGGCTGGGCTGCCGGTGCAGGCATCGAATACGCGTTCGCACCGCATTGGAGCGCGCGCCTGGAGTATCTCTACAGCAAATTCGACACGGATCACGTGCAGTTTGCATCGGGCGCGCAATATGCGTCGACGATGGACCTGCAATCGATACGCATCGGGCTTAATCGAAAGATCGACTGGTCCGGATCACAACAGCCTGCTGCAACGAGCCTCGATTCGGAATCCGACCGCTGGGAAATTCACGGTCAAACCACTTACATCCAACAGGGCTATCCGGCCTTTCGGGCGCGCTACTCCGGCCCGAACAGTCTGACGCCGGCCGCACAGAGCCAGCAGACCTGGAGCAACAGCCTGTTCCTGAACGCGCGCCTGTGGGACGGCGGCGAGGTCTATTACAATCCGGAACTGCTGCAGGGATTCGGTCTCAACGACACCGTCGGCGCCGGCGGCTTTCCTAGCGGCGAAGCGCAGAAATCCAACTTTCCCTACCCGCACTACAACACCTCGCGATTGTTCCTGCGCCAGACCTTCGGCTTCGGCGGCGAGCAGGAAGAGCTTGCAAGCGCCCCTAACCAACTCGCCGGCAAGGCGGACGTCTCGCGCCTGACGTTGCAGCTGGGCAAGTTCGCGGCGACCGACGTGTTCGACGGCAATGCCTATGCCAAGGATACCCGCAAGGATTTCATGAACTGGGCGCTGTGGGCACCCGGTGCATTCGACTATGCCGCGGATCGGCTCGGCCTGACCTATGGTGCAACAGCGGAGTTGAACCAGAAGCAATGGGCGCTTCGCGGCGGTTACTTCATGATGGGTGCAGAGTCGAACTCCAACAGCTTCGACACGCACATCCCGCAACGCGGCCAGTACGTGATCGAGTTGGAAACCCGTTACAGCCTGTTCTCGCAGCCTGGCAAAATTCGCACCATCGGCTGGCTGAGCAGCGCCTTTTCCGGCAGCTATCGCGATACGCTCGCCAATCCGGCACTCAATCTCGATATCGCACAAACGCGCCAGGGCCGCCTGAAGTATGGCTATGTCGTCAATCTCGAGCAGGCGCTGGCCGATGACATCGGCTTGTTCGGACGCTGGAGCTGGAACGACGGCAAGACCGAAATTATGTCGTTCACCGACATCGACGCGAGCCTGTCATTCGGAACGTCAATCAAAGGCGCGCGTTGGGGCCGCCCCGATGACGTGATCGGCCTCGGCGGCGCTATCAACGCGCTGTCGAGGGATCATCGCGATTTTATCGCAGCCGGCGGGCTCGGCGTGTTGATTGGCGACGGCCAACTCAATTACCGCAAGGAGCGCATCCTCGAGGCCTACTACGCCTATGCGATCAACAAGCAAGTGACGCTGACGGCCGACTATCAGCTCATCACCAACCCGGCCTACAACGCCGACCGCGGACCGGTCTCGATATTTTCCGGACGTCTGCACGGCGAATTCTAG
PROTEIN sequence
Length: 640
MGNFMKPVWMAMSAGFCALGGVATAADLPAALPVKAPVPYTRLLDPTFSAADNRFGGMIGGLQAGYNVALPSGLLLGIEADLSFPNYIDSNAVVATLATRRSDILQKLDYSGTARARIGYASGPWLAYATGGLAWASGRFIDTQPDGSADKHLDTRLGWAAGAGIEYAFAPHWSARLEYLYSKFDTDHVQFASGAQYASTMDLQSIRIGLNRKIDWSGSQQPAATSLDSESDRWEIHGQTTYIQQGYPAFRARYSGPNSLTPAAQSQQTWSNSLFLNARLWDGGEVYYNPELLQGFGLNDTVGAGGFPSGEAQKSNFPYPHYNTSRLFLRQTFGFGGEQEELASAPNQLAGKADVSRLTLQLGKFAATDVFDGNAYAKDTRKDFMNWALWAPGAFDYAADRLGLTYGATAELNQKQWALRGGYFMMGAESNSNSFDTHIPQRGQYVIELETRYSLFSQPGKIRTIGWLSSAFSGSYRDTLANPALNLDIAQTRQGRLKYGYVVNLEQALADDIGLFGRWSWNDGKTEIMSFTDIDASLSFGTSIKGARWGRPDDVIGLGGAINALSRDHRDFIAAGGLGVLIGDGQLNYRKERILEAYYAYAINKQVTLTADYQLITNPAYNADRGPVSIFSGRLHGEF*