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SCNpilot_expt_500_bf_scaffold_13474_3

Organism: SCNPILOT_CONT_500_P_Rhizobiales_62_14

partial RP 39 / 55 MC: 1 BSCG 38 / 51 MC: 3 ASCG 8 / 38
Location: 947..1213

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S20 n=2 Tax=Rhodopseudomonas palustris RepID=RS20_RHOPA similarity UNIREF
DB: UNIREF100
  • Identity: 88.6
  • Coverage: 88.0
  • Bit_score: 147
  • Evalue 5.70e-33
rpsT; 30S ribosomal protein S20; K02968 small subunit ribosomal protein S20 similarity KEGG
DB: KEGG
  • Identity: 88.6
  • Coverage: 88.0
  • Bit_score: 147
  • Evalue 1.80e-33
30S ribosomal protein S20 {ECO:0000255|HAMAP-Rule:MF_00500}; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain TIE-1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.6
  • Coverage: 88.0
  • Bit_score: 147
  • Evalue 8.00e-33

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 267
ATGGCCAATACATCCTCCGCCAAGAAGGCGACGCGCAAGATTGCCCGCCGCACCGCCGTCAACAAATCCCGCCGCACCCAGATGCGCGGCTCGGTTCGCCTCGTCGAGGAAGCCATCGCCAGCGGCGATCGCGCCGCCGCGCTGAAGGCATTCGCAGTTGCCGAGCCGGAGCTGATGCAGGCAGCCCAGCGCAACATTATTCACAAGAACAGCGCCAGCCGAAAGGTGTCGCGTCTGTCGCATCGGATCGCCAAGCTGGCGCAGTAA
PROTEIN sequence
Length: 89
MANTSSAKKATRKIARRTAVNKSRRTQMRGSVRLVEEAIASGDRAAALKAFAVAEPELMQAAQRNIIHKNSASRKVSRLSHRIAKLAQ*