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SCNpilot_expt_500_bf_scaffold_15254_1

Organism: SCNPILOT_CONT_500_P_Rhizobiales_62_14

partial RP 39 / 55 MC: 1 BSCG 38 / 51 MC: 3 ASCG 8 / 38
Location: comp(32..853)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter permease n=1 Tax=Pantoea dispersa EGD-AAK13 RepID=U1V4A5_9ENTR similarity UNIREF
DB: UNIREF100
  • Identity: 65.1
  • Coverage: 272.0
  • Bit_score: 372
  • Evalue 4.40e-100
  • rbh
Bradyrhizobium elkanii strain UASWS1015 Contig169, whole genome shotgun sequence {ECO:0000313|EMBL:KIU50540.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.7
  • Coverage: 273.0
  • Bit_score: 465
  • Evalue 7.00e-128
binding-protein-dependent transport system inner membrane protein; K02053 putative spermidine/putrescine transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 67.4
  • Coverage: 273.0
  • Bit_score: 362
  • Evalue 1.40e-97
  • rbh

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Taxonomy

Bradyrhizobium elkanii → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 822
ATGATACCGCGCTCGACGTATCAAAGGATGCTTGGCTGGATCGGCCGGATCACCTTGATCTGCATCGTGGCCTTTTTGATTCTGCCGGCGGCGGTGGTCACCATTGCGGCCTTCAACGACAAGCCGATCCTGTCGTTCCCTCCGCAGACGTGGTCGTGGCGCTGGTTTGCGCGCGCCCTGGCCTATGACGATTTTCGTCATGGCTTTTTCAACGGACTGATCGTTACGGCCTGGAGTTCGACGATCGCCCTCTTTGTTGGCGCCATGTTCGCGTTCGCGATCGATCGCTACAGATTTCCGTTCAAATCGCTCATCGAAGGCATTCTGGTCTCACCGCTGGTGATCCCGCATTTCACCGTCGGGCTTGGGTTCCTGATCCTTGCGGCGCAGGTCGGGCTAAGCCGTGGGTTTGCGGTCGTGGTCGCCTGTCATGTCGTTCTGGTGCTGCCGTTCGTGCTTCGAAGCATTTACGTCTCATTGAAGAACCTCGACCAGAGTTATGAGCTTGCCGCGGCCAGCCTGGGCGCCACGCCGTTTCGCGTCCTGACAACGATCACGGTGCCTCTGCTGTTGCCCGGTCTTGTCAGCGGCTGGTTGTTCGCGGCAATTCTGTCCTTCAATGAATTCACGGCCTCGCTTTTCGTAACCTCCCAGCGCACGCAAACATTGCCCGTCGCCATGTATAATTATGTACGCGAGTTCGCCGATCCGTCGATGGCTGCGCTGTCCGTCATGTATATCGCCGGCACGGCCGCACTGATCGCCTTCGCAACGTCGTTCCTTGGTCTCGGCAAGGTGCTCAATATCGAGCAGACTCACTAG
PROTEIN sequence
Length: 274
MIPRSTYQRMLGWIGRITLICIVAFLILPAAVVTIAAFNDKPILSFPPQTWSWRWFARALAYDDFRHGFFNGLIVTAWSSTIALFVGAMFAFAIDRYRFPFKSLIEGILVSPLVIPHFTVGLGFLILAAQVGLSRGFAVVVACHVVLVLPFVLRSIYVSLKNLDQSYELAAASLGATPFRVLTTITVPLLLPGLVSGWLFAAILSFNEFTASLFVTSQRTQTLPVAMYNYVREFADPSMAALSVMYIAGTAALIAFATSFLGLGKVLNIEQTH*